Protein–RNA interactions for Protein: Q3UW12

Cnga4, Cyclic nucleotide-gated cation channel alpha-4, mousemouse

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cnga4Q3UW12 AC121961.1-201ENSMUST00000218594 1779 ntBASIC18.42■□□□□ 0.54
Cnga4Q3UW12 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cnga4Q3UW12 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cnga4Q3UW12 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cnga4Q3UW12 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cnga4Q3UW12 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Cnga4Q3UW12 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC18.42■□□□□ 0.54
Cnga4Q3UW12 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC18.42■□□□□ 0.54
Cnga4Q3UW12 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC18.42■□□□□ 0.54
Cnga4Q3UW12 Gm27032-201ENSMUST00000183124 1116 ntBASIC18.42■□□□□ 0.54
Cnga4Q3UW12 Gm37805-201ENSMUST00000192612 1094 ntBASIC18.42■□□□□ 0.54
Cnga4Q3UW12 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Cnga4Q3UW12 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC18.42■□□□□ 0.54
Cnga4Q3UW12 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cnga4Q3UW12 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cnga4Q3UW12 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cnga4Q3UW12 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cnga4Q3UW12 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cnga4Q3UW12 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cnga4Q3UW12 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC18.41■□□□□ 0.54
Cnga4Q3UW12 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Cnga4Q3UW12 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cnga4Q3UW12 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Cnga4Q3UW12 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cnga4Q3UW12 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Cnga4Q3UW12 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cnga4Q3UW12 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cnga4Q3UW12 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Cnga4Q3UW12 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC18.4■□□□□ 0.54
Cnga4Q3UW12 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Cnga4Q3UW12 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Cnga4Q3UW12 Gm12251-201ENSMUST00000117893 792 ntBASIC18.4■□□□□ 0.54
Cnga4Q3UW12 Gm11421-201ENSMUST00000122124 294 ntBASIC18.4■□□□□ 0.54
Cnga4Q3UW12 Gm14117-201ENSMUST00000122417 843 ntBASIC18.4■□□□□ 0.54
Cnga4Q3UW12 Gm27801-201ENSMUST00000184174 223 ntBASIC18.4■□□□□ 0.54
Cnga4Q3UW12 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC18.4■□□□□ 0.54
Cnga4Q3UW12 Gm45102-201ENSMUST00000207427 857 ntBASIC18.4■□□□□ 0.54
Cnga4Q3UW12 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cnga4Q3UW12 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cnga4Q3UW12 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cnga4Q3UW12 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cnga4Q3UW12 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cnga4Q3UW12 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cnga4Q3UW12 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Cnga4Q3UW12 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Cnga4Q3UW12 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cnga4Q3UW12 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Cnga4Q3UW12 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Cnga4Q3UW12 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC18.39■□□□□ 0.54
Cnga4Q3UW12 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Cnga4Q3UW12 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.54
Cnga4Q3UW12 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Cnga4Q3UW12 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cnga4Q3UW12 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cnga4Q3UW12 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Cnga4Q3UW12 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cnga4Q3UW12 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cnga4Q3UW12 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cnga4Q3UW12 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cnga4Q3UW12 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cnga4Q3UW12 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC18.38■□□□□ 0.53
Cnga4Q3UW12 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cnga4Q3UW12 Gm43137-201ENSMUST00000198052 594 ntBASIC18.38■□□□□ 0.53
Cnga4Q3UW12 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cnga4Q3UW12 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cnga4Q3UW12 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cnga4Q3UW12 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Cnga4Q3UW12 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cnga4Q3UW12 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Cnga4Q3UW12 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cnga4Q3UW12 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cnga4Q3UW12 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cnga4Q3UW12 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cnga4Q3UW12 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Cnga4Q3UW12 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Cnga4Q3UW12 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cnga4Q3UW12 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Cnga4Q3UW12 Gm43548-201ENSMUST00000197139 2353 ntBASIC18.37■□□□□ 0.53
Cnga4Q3UW12 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Cnga4Q3UW12 Flvcr1-202ENSMUST00000191946 1216 ntBASIC18.37■□□□□ 0.53
Cnga4Q3UW12 AC107452.1-201ENSMUST00000227963 481 ntBASIC18.37■□□□□ 0.53
Cnga4Q3UW12 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cnga4Q3UW12 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC18.37■□□□□ 0.53
Cnga4Q3UW12 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cnga4Q3UW12 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cnga4Q3UW12 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC18.37■□□□□ 0.53
Cnga4Q3UW12 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cnga4Q3UW12 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cnga4Q3UW12 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cnga4Q3UW12 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC18.37■□□□□ 0.53
Cnga4Q3UW12 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cnga4Q3UW12 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cnga4Q3UW12 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Cnga4Q3UW12 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cnga4Q3UW12 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
Cnga4Q3UW12 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cnga4Q3UW12 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Cnga4Q3UW12 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
Cnga4Q3UW12 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Cnga4Q3UW12 Tgds-204ENSMUST00000228543 1594 ntBASIC18.36■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms