Protein–RNA interactions for Protein: Q3UTQ8

Cdkl5, Cyclin-dependent kinase-like 5, mousemouse

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkl5Q3UTQ8 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Cdkl5Q3UTQ8 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Cdkl5Q3UTQ8 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Cdkl5Q3UTQ8 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC21.02■□□□□ 0.96
Cdkl5Q3UTQ8 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Cdkl5Q3UTQ8 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Cdkl5Q3UTQ8 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Cdkl5Q3UTQ8 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Cdkl5Q3UTQ8 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Cdkl5Q3UTQ8 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
Cdkl5Q3UTQ8 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.95
Cdkl5Q3UTQ8 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cdkl5Q3UTQ8 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cdkl5Q3UTQ8 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC21.01■□□□□ 0.95
Cdkl5Q3UTQ8 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC21.01■□□□□ 0.95
Cdkl5Q3UTQ8 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC21.01■□□□□ 0.95
Cdkl5Q3UTQ8 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC21.01■□□□□ 0.95
Cdkl5Q3UTQ8 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cdkl5Q3UTQ8 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Cdkl5Q3UTQ8 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cdkl5Q3UTQ8 Gm38345-201ENSMUST00000192635 1748 ntBASIC21.01■□□□□ 0.95
Cdkl5Q3UTQ8 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Cdkl5Q3UTQ8 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Cdkl5Q3UTQ8 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Cdkl5Q3UTQ8 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC21■□□□□ 0.95
Cdkl5Q3UTQ8 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Cdkl5Q3UTQ8 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Cdkl5Q3UTQ8 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC21■□□□□ 0.95
Cdkl5Q3UTQ8 Gm13148-201ENSMUST00000118892 745 ntBASIC21■□□□□ 0.95
Cdkl5Q3UTQ8 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC21■□□□□ 0.95
Cdkl5Q3UTQ8 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC21■□□□□ 0.95
Cdkl5Q3UTQ8 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Cdkl5Q3UTQ8 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Cdkl5Q3UTQ8 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC21■□□□□ 0.95
Cdkl5Q3UTQ8 Gm5953-201ENSMUST00000220644 2616 ntBASIC21■□□□□ 0.95
Cdkl5Q3UTQ8 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Cdkl5Q3UTQ8 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Cdkl5Q3UTQ8 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Cdkl5Q3UTQ8 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
Cdkl5Q3UTQ8 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cdkl5Q3UTQ8 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Cdkl5Q3UTQ8 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Cdkl5Q3UTQ8 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC20.99■□□□□ 0.95
Cdkl5Q3UTQ8 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cdkl5Q3UTQ8 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cdkl5Q3UTQ8 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cdkl5Q3UTQ8 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cdkl5Q3UTQ8 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cdkl5Q3UTQ8 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cdkl5Q3UTQ8 AC122335.2-201ENSMUST00000213901 6181 ntBASIC20.98■□□□□ 0.95
Cdkl5Q3UTQ8 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC20.98■□□□□ 0.95
Cdkl5Q3UTQ8 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
Cdkl5Q3UTQ8 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC20.98■□□□□ 0.95
Cdkl5Q3UTQ8 AC140264.2-202ENSMUST00000218746 817 ntBASIC20.98■□□□□ 0.95
Cdkl5Q3UTQ8 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Cdkl5Q3UTQ8 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Cdkl5Q3UTQ8 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Cdkl5Q3UTQ8 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Cdkl5Q3UTQ8 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cdkl5Q3UTQ8 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cdkl5Q3UTQ8 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Cdkl5Q3UTQ8 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cdkl5Q3UTQ8 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Cdkl5Q3UTQ8 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
Cdkl5Q3UTQ8 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC20.97■□□□□ 0.95
Cdkl5Q3UTQ8 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC20.97■□□□□ 0.95
Cdkl5Q3UTQ8 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
Cdkl5Q3UTQ8 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cdkl5Q3UTQ8 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cdkl5Q3UTQ8 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cdkl5Q3UTQ8 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC20.97■□□□□ 0.95
Cdkl5Q3UTQ8 Gm26524-201ENSMUST00000192339 390 ntBASIC20.97■□□□□ 0.95
Cdkl5Q3UTQ8 AC164629.5-201ENSMUST00000220387 632 ntBASIC20.97■□□□□ 0.95
Cdkl5Q3UTQ8 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cdkl5Q3UTQ8 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cdkl5Q3UTQ8 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC20.97■□□□□ 0.95
Cdkl5Q3UTQ8 Fam105a-203ENSMUST00000226170 3043 ntBASIC20.97■□□□□ 0.95
Cdkl5Q3UTQ8 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cdkl5Q3UTQ8 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cdkl5Q3UTQ8 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Cdkl5Q3UTQ8 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC20.97■□□□□ 0.95
Cdkl5Q3UTQ8 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cdkl5Q3UTQ8 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cdkl5Q3UTQ8 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC20.96■□□□□ 0.95
Cdkl5Q3UTQ8 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC20.96■□□□□ 0.95
Cdkl5Q3UTQ8 Grk6-206ENSMUST00000224995 2971 ntBASIC20.96■□□□□ 0.95
Cdkl5Q3UTQ8 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cdkl5Q3UTQ8 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Cdkl5Q3UTQ8 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cdkl5Q3UTQ8 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cdkl5Q3UTQ8 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cdkl5Q3UTQ8 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Cdkl5Q3UTQ8 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Cdkl5Q3UTQ8 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cdkl5Q3UTQ8 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cdkl5Q3UTQ8 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC20.96■□□□□ 0.95
Cdkl5Q3UTQ8 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC20.96■□□□□ 0.95
Cdkl5Q3UTQ8 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cdkl5Q3UTQ8 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC20.96■□□□□ 0.95
Cdkl5Q3UTQ8 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms