Protein–RNA interactions for Protein: Q3UQS2

Lsmem1, Leucine-rich single-pass membrane protein 1, mousemouse

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsmem1Q3UQS2 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Lsmem1Q3UQS2 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Lsmem1Q3UQS2 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Lsmem1Q3UQS2 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Lsmem1Q3UQS2 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Lsmem1Q3UQS2 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC18.4■□□□□ 0.54
Lsmem1Q3UQS2 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Lsmem1Q3UQS2 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC18.4■□□□□ 0.54
Lsmem1Q3UQS2 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC18.4■□□□□ 0.54
Lsmem1Q3UQS2 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC18.4■□□□□ 0.54
Lsmem1Q3UQS2 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Lsmem1Q3UQS2 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Lsmem1Q3UQS2 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Lsmem1Q3UQS2 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Lsmem1Q3UQS2 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Lsmem1Q3UQS2 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Lsmem1Q3UQS2 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Lsmem1Q3UQS2 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Lsmem1Q3UQS2 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Lsmem1Q3UQS2 Gm11249-201ENSMUST00000117071 859 ntBASIC18.39■□□□□ 0.53
Lsmem1Q3UQS2 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Lsmem1Q3UQS2 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC18.39■□□□□ 0.53
Lsmem1Q3UQS2 Fst-202ENSMUST00000223640 2612 ntBASIC18.39■□□□□ 0.53
Lsmem1Q3UQS2 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Lsmem1Q3UQS2 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Lsmem1Q3UQS2 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Lsmem1Q3UQS2 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Lsmem1Q3UQS2 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Lsmem1Q3UQS2 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Lsmem1Q3UQS2 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Lsmem1Q3UQS2 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Lsmem1Q3UQS2 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Lsmem1Q3UQS2 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC18.38■□□□□ 0.53
Lsmem1Q3UQS2 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Lsmem1Q3UQS2 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Lsmem1Q3UQS2 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Lsmem1Q3UQS2 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Lsmem1Q3UQS2 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Lsmem1Q3UQS2 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
Lsmem1Q3UQS2 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Lsmem1Q3UQS2 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Lsmem1Q3UQS2 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Lsmem1Q3UQS2 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Lsmem1Q3UQS2 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Lsmem1Q3UQS2 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Lsmem1Q3UQS2 Gm27275-201ENSMUST00000184318 272 ntBASIC18.37■□□□□ 0.53
Lsmem1Q3UQS2 Gm37856-201ENSMUST00000191634 999 ntBASIC18.37■□□□□ 0.53
Lsmem1Q3UQS2 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Lsmem1Q3UQS2 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Lsmem1Q3UQS2 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Lsmem1Q3UQS2 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Lsmem1Q3UQS2 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Lsmem1Q3UQS2 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Lsmem1Q3UQS2 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Lsmem1Q3UQS2 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Lsmem1Q3UQS2 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Lsmem1Q3UQS2 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC18.36■□□□□ 0.53
Lsmem1Q3UQS2 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC18.36■□□□□ 0.53
Lsmem1Q3UQS2 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Lsmem1Q3UQS2 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Lsmem1Q3UQS2 Gm12669-201ENSMUST00000122162 1009 ntBASIC18.36■□□□□ 0.53
Lsmem1Q3UQS2 Gm21596-201ENSMUST00000178049 1316 ntBASIC18.36■□□□□ 0.53
Lsmem1Q3UQS2 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Lsmem1Q3UQS2 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Lsmem1Q3UQS2 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Lsmem1Q3UQS2 Mtag2-201ENSMUST00000058665 714 ntBASIC18.36■□□□□ 0.53
Lsmem1Q3UQS2 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC18.36■□□□□ 0.53
Lsmem1Q3UQS2 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Lsmem1Q3UQS2 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC18.35■□□□□ 0.53
Lsmem1Q3UQS2 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Lsmem1Q3UQS2 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC18.35■□□□□ 0.53
Lsmem1Q3UQS2 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC18.35■□□□□ 0.53
Lsmem1Q3UQS2 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Lsmem1Q3UQS2 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Lsmem1Q3UQS2 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Lsmem1Q3UQS2 Gm5953-201ENSMUST00000220644 2616 ntBASIC18.35■□□□□ 0.53
Lsmem1Q3UQS2 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC18.35■□□□□ 0.53
Lsmem1Q3UQS2 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
Lsmem1Q3UQS2 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
Lsmem1Q3UQS2 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Lsmem1Q3UQS2 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Lsmem1Q3UQS2 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Lsmem1Q3UQS2 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Lsmem1Q3UQS2 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Lsmem1Q3UQS2 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Lsmem1Q3UQS2 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Lsmem1Q3UQS2 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Lsmem1Q3UQS2 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Lsmem1Q3UQS2 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Lsmem1Q3UQS2 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC18.34■□□□□ 0.53
Lsmem1Q3UQS2 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Lsmem1Q3UQS2 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Lsmem1Q3UQS2 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Lsmem1Q3UQS2 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Lsmem1Q3UQS2 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Lsmem1Q3UQS2 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
Lsmem1Q3UQS2 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC18.34■□□□□ 0.53
Lsmem1Q3UQS2 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Lsmem1Q3UQS2 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Lsmem1Q3UQS2 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms