Protein–RNA interactions for Protein: Q3UMQ8

Naf1, H/ACA ribonucleoprotein complex non-core subunit NAF1, mousemouse

Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Naf1Q3UMQ8 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Naf1Q3UMQ8 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Naf1Q3UMQ8 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Naf1Q3UMQ8 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Naf1Q3UMQ8 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Naf1Q3UMQ8 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Naf1Q3UMQ8 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
Naf1Q3UMQ8 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
Naf1Q3UMQ8 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Naf1Q3UMQ8 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Naf1Q3UMQ8 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Naf1Q3UMQ8 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Naf1Q3UMQ8 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Naf1Q3UMQ8 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC18.4■□□□□ 0.54
Naf1Q3UMQ8 Gm5784-201ENSMUST00000179344 2478 ntBASIC18.4■□□□□ 0.54
Naf1Q3UMQ8 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Naf1Q3UMQ8 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC18.4■□□□□ 0.54
Naf1Q3UMQ8 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.54
Naf1Q3UMQ8 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Naf1Q3UMQ8 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
Naf1Q3UMQ8 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Naf1Q3UMQ8 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Naf1Q3UMQ8 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Naf1Q3UMQ8 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Naf1Q3UMQ8 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Naf1Q3UMQ8 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC18.39■□□□□ 0.53
Naf1Q3UMQ8 Arhgef33-211ENSMUST00000225658 473 ntBASIC18.39■□□□□ 0.53
Naf1Q3UMQ8 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Naf1Q3UMQ8 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Naf1Q3UMQ8 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Naf1Q3UMQ8 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Naf1Q3UMQ8 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Naf1Q3UMQ8 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Naf1Q3UMQ8 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC18.38■□□□□ 0.53
Naf1Q3UMQ8 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Naf1Q3UMQ8 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Naf1Q3UMQ8 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Naf1Q3UMQ8 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Naf1Q3UMQ8 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Naf1Q3UMQ8 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC18.38■□□□□ 0.53
Naf1Q3UMQ8 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Naf1Q3UMQ8 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Naf1Q3UMQ8 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Naf1Q3UMQ8 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC18.38■□□□□ 0.53
Naf1Q3UMQ8 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Naf1Q3UMQ8 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Naf1Q3UMQ8 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Naf1Q3UMQ8 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Naf1Q3UMQ8 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Naf1Q3UMQ8 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Naf1Q3UMQ8 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Naf1Q3UMQ8 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Naf1Q3UMQ8 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Naf1Q3UMQ8 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Naf1Q3UMQ8 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Naf1Q3UMQ8 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC18.37■□□□□ 0.53
Naf1Q3UMQ8 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Naf1Q3UMQ8 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Naf1Q3UMQ8 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Naf1Q3UMQ8 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
Naf1Q3UMQ8 Gm6576-201ENSMUST00000169678 883 ntBASIC18.37■□□□□ 0.53
Naf1Q3UMQ8 Mir6982-201ENSMUST00000184354 68 ntBASIC18.37■□□□□ 0.53
Naf1Q3UMQ8 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC18.37■□□□□ 0.53
Naf1Q3UMQ8 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC18.37■□□□□ 0.53
Naf1Q3UMQ8 Gm29241-201ENSMUST00000189260 1096 ntBASIC18.37■□□□□ 0.53
Naf1Q3UMQ8 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Naf1Q3UMQ8 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Naf1Q3UMQ8 CT010444.2-201ENSMUST00000217877 1629 ntBASIC18.37■□□□□ 0.53
Naf1Q3UMQ8 Gm44544-201ENSMUST00000207052 1844 ntBASIC18.37■□□□□ 0.53
Naf1Q3UMQ8 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Naf1Q3UMQ8 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Naf1Q3UMQ8 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Naf1Q3UMQ8 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Naf1Q3UMQ8 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Naf1Q3UMQ8 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Naf1Q3UMQ8 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Naf1Q3UMQ8 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Naf1Q3UMQ8 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Naf1Q3UMQ8 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Naf1Q3UMQ8 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Naf1Q3UMQ8 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC18.35■□□□□ 0.53
Naf1Q3UMQ8 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Naf1Q3UMQ8 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Naf1Q3UMQ8 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Naf1Q3UMQ8 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Naf1Q3UMQ8 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
Naf1Q3UMQ8 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Naf1Q3UMQ8 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Naf1Q3UMQ8 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Naf1Q3UMQ8 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Naf1Q3UMQ8 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC18.35■□□□□ 0.53
Naf1Q3UMQ8 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC18.35■□□□□ 0.53
Naf1Q3UMQ8 Gm715-201ENSMUST00000117865 831 ntBASIC18.35■□□□□ 0.53
Naf1Q3UMQ8 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC18.35■□□□□ 0.53
Naf1Q3UMQ8 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC18.35■□□□□ 0.53
Naf1Q3UMQ8 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC18.35■□□□□ 0.53
Naf1Q3UMQ8 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC18.35■□□□□ 0.53
Naf1Q3UMQ8 AL672049.1-201ENSMUST00000197943 91 ntBASIC18.35■□□□□ 0.53
Naf1Q3UMQ8 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Naf1Q3UMQ8 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 18 ms