Protein–RNA interactions for Protein: Q3UMB5

Smcr8, Guanine nucleotide exchange protein SMCR8, mousemouse

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smcr8Q3UMB5 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
Smcr8Q3UMB5 Alkbh1-212ENSMUST00000185301 408 ntBASIC19.45■□□□□ 0.7
Smcr8Q3UMB5 AC153881.1-201ENSMUST00000214448 284 ntBASIC19.45■□□□□ 0.7
Smcr8Q3UMB5 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Smcr8Q3UMB5 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Smcr8Q3UMB5 Rncr4-201ENSMUST00000194541 2234 ntBASIC19.45■□□□□ 0.7
Smcr8Q3UMB5 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Smcr8Q3UMB5 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Smcr8Q3UMB5 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Smcr8Q3UMB5 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Smcr8Q3UMB5 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Smcr8Q3UMB5 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Smcr8Q3UMB5 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC19.44■□□□□ 0.7
Smcr8Q3UMB5 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Smcr8Q3UMB5 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC19.44■□□□□ 0.7
Smcr8Q3UMB5 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Smcr8Q3UMB5 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Smcr8Q3UMB5 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Smcr8Q3UMB5 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Smcr8Q3UMB5 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Smcr8Q3UMB5 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Smcr8Q3UMB5 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Smcr8Q3UMB5 Gm29241-201ENSMUST00000189260 1096 ntBASIC19.44■□□□□ 0.7
Smcr8Q3UMB5 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC19.44■□□□□ 0.7
Smcr8Q3UMB5 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Smcr8Q3UMB5 Gm43231-201ENSMUST00000202960 2258 ntBASIC19.44■□□□□ 0.7
Smcr8Q3UMB5 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Smcr8Q3UMB5 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC19.44■□□□□ 0.7
Smcr8Q3UMB5 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Smcr8Q3UMB5 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Smcr8Q3UMB5 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Smcr8Q3UMB5 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Smcr8Q3UMB5 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Smcr8Q3UMB5 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC19.43■□□□□ 0.7
Smcr8Q3UMB5 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Smcr8Q3UMB5 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
Smcr8Q3UMB5 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
Smcr8Q3UMB5 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC19.43■□□□□ 0.7
Smcr8Q3UMB5 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Smcr8Q3UMB5 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Smcr8Q3UMB5 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC19.43■□□□□ 0.7
Smcr8Q3UMB5 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Smcr8Q3UMB5 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Smcr8Q3UMB5 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Smcr8Q3UMB5 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Smcr8Q3UMB5 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Smcr8Q3UMB5 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Smcr8Q3UMB5 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Smcr8Q3UMB5 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC19.42■□□□□ 0.7
Smcr8Q3UMB5 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC19.42■□□□□ 0.7
Smcr8Q3UMB5 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC19.42■□□□□ 0.7
Smcr8Q3UMB5 Mtag2-201ENSMUST00000058665 714 ntBASIC19.42■□□□□ 0.7
Smcr8Q3UMB5 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Smcr8Q3UMB5 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Smcr8Q3UMB5 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Smcr8Q3UMB5 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Smcr8Q3UMB5 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Smcr8Q3UMB5 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Smcr8Q3UMB5 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC19.41■□□□□ 0.7
Smcr8Q3UMB5 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Smcr8Q3UMB5 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Smcr8Q3UMB5 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Smcr8Q3UMB5 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Smcr8Q3UMB5 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Smcr8Q3UMB5 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Smcr8Q3UMB5 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Smcr8Q3UMB5 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Smcr8Q3UMB5 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Smcr8Q3UMB5 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Smcr8Q3UMB5 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Smcr8Q3UMB5 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Smcr8Q3UMB5 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Smcr8Q3UMB5 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC19.4■□□□□ 0.7
Smcr8Q3UMB5 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Smcr8Q3UMB5 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Smcr8Q3UMB5 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Smcr8Q3UMB5 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Smcr8Q3UMB5 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Smcr8Q3UMB5 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Smcr8Q3UMB5 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Smcr8Q3UMB5 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC19.4■□□□□ 0.7
Smcr8Q3UMB5 AL672049.1-201ENSMUST00000197943 91 ntBASIC19.4■□□□□ 0.7
Smcr8Q3UMB5 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Smcr8Q3UMB5 Zfp783-201ENSMUST00000095946 670 ntBASIC19.4■□□□□ 0.7
Smcr8Q3UMB5 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Smcr8Q3UMB5 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Smcr8Q3UMB5 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Smcr8Q3UMB5 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Smcr8Q3UMB5 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Smcr8Q3UMB5 BC021767-201ENSMUST00000126387 1716 ntBASIC19.39■□□□□ 0.7
Smcr8Q3UMB5 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Smcr8Q3UMB5 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Smcr8Q3UMB5 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Smcr8Q3UMB5 Gm715-201ENSMUST00000117865 831 ntBASIC19.39■□□□□ 0.69
Smcr8Q3UMB5 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Smcr8Q3UMB5 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC19.39■□□□□ 0.69
Smcr8Q3UMB5 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Smcr8Q3UMB5 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Smcr8Q3UMB5 CT010444.2-201ENSMUST00000217877 1629 ntBASIC19.39■□□□□ 0.69
Smcr8Q3UMB5 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms