Protein–RNA interactions for Protein: Q3UHJ8

Rnf44, RING finger protein 44, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf44Q3UHJ8 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rnf44Q3UHJ8 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC17.54■□□□□ 0.4
Rnf44Q3UHJ8 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC17.54■□□□□ 0.4
Rnf44Q3UHJ8 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rnf44Q3UHJ8 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rnf44Q3UHJ8 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rnf44Q3UHJ8 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rnf44Q3UHJ8 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Rnf44Q3UHJ8 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rnf44Q3UHJ8 Gm43213-201ENSMUST00000151866 1790 ntBASIC17.53■□□□□ 0.4
Rnf44Q3UHJ8 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rnf44Q3UHJ8 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rnf44Q3UHJ8 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC17.53■□□□□ 0.4
Rnf44Q3UHJ8 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rnf44Q3UHJ8 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Rnf44Q3UHJ8 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rnf44Q3UHJ8 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rnf44Q3UHJ8 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rnf44Q3UHJ8 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rnf44Q3UHJ8 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Rnf44Q3UHJ8 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rnf44Q3UHJ8 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Rnf44Q3UHJ8 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Rnf44Q3UHJ8 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rnf44Q3UHJ8 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rnf44Q3UHJ8 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rnf44Q3UHJ8 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Rnf44Q3UHJ8 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rnf44Q3UHJ8 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
Rnf44Q3UHJ8 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Rnf44Q3UHJ8 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Rnf44Q3UHJ8 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rnf44Q3UHJ8 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC17.52■□□□□ 0.4
Rnf44Q3UHJ8 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rnf44Q3UHJ8 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Rnf44Q3UHJ8 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Rnf44Q3UHJ8 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
Rnf44Q3UHJ8 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Rnf44Q3UHJ8 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Rnf44Q3UHJ8 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
Rnf44Q3UHJ8 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Rnf44Q3UHJ8 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rnf44Q3UHJ8 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rnf44Q3UHJ8 Gm2399-201ENSMUST00000104944 225 ntBASIC17.51■□□□□ 0.39
Rnf44Q3UHJ8 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC17.51■□□□□ 0.39
Rnf44Q3UHJ8 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Rnf44Q3UHJ8 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Rnf44Q3UHJ8 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Rnf44Q3UHJ8 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Rnf44Q3UHJ8 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Rnf44Q3UHJ8 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC17.51■□□□□ 0.39
Rnf44Q3UHJ8 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Rnf44Q3UHJ8 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rnf44Q3UHJ8 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rnf44Q3UHJ8 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rnf44Q3UHJ8 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rnf44Q3UHJ8 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rnf44Q3UHJ8 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rnf44Q3UHJ8 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Rnf44Q3UHJ8 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rnf44Q3UHJ8 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC17.5■□□□□ 0.39
Rnf44Q3UHJ8 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Rnf44Q3UHJ8 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rnf44Q3UHJ8 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC17.5■□□□□ 0.39
Rnf44Q3UHJ8 Gm20049-201ENSMUST00000219950 730 ntBASIC17.5■□□□□ 0.39
Rnf44Q3UHJ8 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rnf44Q3UHJ8 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Rnf44Q3UHJ8 AC121961.1-201ENSMUST00000218594 1779 ntBASIC17.5■□□□□ 0.39
Rnf44Q3UHJ8 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rnf44Q3UHJ8 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Rnf44Q3UHJ8 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rnf44Q3UHJ8 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rnf44Q3UHJ8 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC17.5■□□□□ 0.39
Rnf44Q3UHJ8 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rnf44Q3UHJ8 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rnf44Q3UHJ8 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rnf44Q3UHJ8 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rnf44Q3UHJ8 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC17.49■□□□□ 0.39
Rnf44Q3UHJ8 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rnf44Q3UHJ8 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC17.49■□□□□ 0.39
Rnf44Q3UHJ8 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Rnf44Q3UHJ8 Wnt10b-205ENSMUST00000226846 1204 ntBASIC17.49■□□□□ 0.39
Rnf44Q3UHJ8 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Rnf44Q3UHJ8 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rnf44Q3UHJ8 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC17.49■□□□□ 0.39
Rnf44Q3UHJ8 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Rnf44Q3UHJ8 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Rnf44Q3UHJ8 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Rnf44Q3UHJ8 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Rnf44Q3UHJ8 Gm38308-201ENSMUST00000194934 1809 ntBASIC17.49■□□□□ 0.39
Rnf44Q3UHJ8 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rnf44Q3UHJ8 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rnf44Q3UHJ8 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rnf44Q3UHJ8 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rnf44Q3UHJ8 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rnf44Q3UHJ8 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Rnf44Q3UHJ8 Gm12527-201ENSMUST00000117967 564 ntBASIC17.48■□□□□ 0.39
Rnf44Q3UHJ8 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC17.48■□□□□ 0.39
Rnf44Q3UHJ8 Gm2559-201ENSMUST00000201323 363 ntBASIC17.48■□□□□ 0.39
Rnf44Q3UHJ8 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 489.2 ms