Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC16.79■□□□□ 0.28
Spg11Q3UHA3 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Spg11Q3UHA3 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Spg11Q3UHA3 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC16.79■□□□□ 0.28
Spg11Q3UHA3 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Spg11Q3UHA3 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Spg11Q3UHA3 Gm10576-201ENSMUST00000191927 825 ntBASIC16.79■□□□□ 0.28
Spg11Q3UHA3 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC16.79■□□□□ 0.28
Spg11Q3UHA3 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Spg11Q3UHA3 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
Spg11Q3UHA3 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC16.79■□□□□ 0.28
Spg11Q3UHA3 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Spg11Q3UHA3 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC16.79■□□□□ 0.28
Spg11Q3UHA3 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Spg11Q3UHA3 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Spg11Q3UHA3 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Spg11Q3UHA3 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Spg11Q3UHA3 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Spg11Q3UHA3 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Spg11Q3UHA3 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Spg11Q3UHA3 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Spg11Q3UHA3 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Spg11Q3UHA3 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Spg11Q3UHA3 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Spg11Q3UHA3 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Spg11Q3UHA3 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Spg11Q3UHA3 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Spg11Q3UHA3 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC16.78■□□□□ 0.28
Spg11Q3UHA3 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Spg11Q3UHA3 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Spg11Q3UHA3 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Spg11Q3UHA3 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Spg11Q3UHA3 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Spg11Q3UHA3 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC16.77■□□□□ 0.28
Spg11Q3UHA3 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Spg11Q3UHA3 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Spg11Q3UHA3 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Spg11Q3UHA3 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Spg11Q3UHA3 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Spg11Q3UHA3 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.27
Spg11Q3UHA3 Gm43332-201ENSMUST00000202511 1044 ntBASIC16.77■□□□□ 0.27
Spg11Q3UHA3 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Spg11Q3UHA3 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Spg11Q3UHA3 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC16.77■□□□□ 0.27
Spg11Q3UHA3 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Spg11Q3UHA3 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Spg11Q3UHA3 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Spg11Q3UHA3 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
Spg11Q3UHA3 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC16.77■□□□□ 0.27
Spg11Q3UHA3 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC16.76■□□□□ 0.27
Spg11Q3UHA3 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
Spg11Q3UHA3 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Spg11Q3UHA3 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Spg11Q3UHA3 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Spg11Q3UHA3 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Spg11Q3UHA3 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC16.76■□□□□ 0.27
Spg11Q3UHA3 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC16.76■□□□□ 0.27
Spg11Q3UHA3 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Spg11Q3UHA3 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Spg11Q3UHA3 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Spg11Q3UHA3 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Spg11Q3UHA3 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Spg11Q3UHA3 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Spg11Q3UHA3 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC16.75■□□□□ 0.27
Spg11Q3UHA3 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC16.75■□□□□ 0.27
Spg11Q3UHA3 AC161829.1-201ENSMUST00000220298 281 ntBASIC16.75■□□□□ 0.27
Spg11Q3UHA3 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Spg11Q3UHA3 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
Spg11Q3UHA3 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Spg11Q3UHA3 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Spg11Q3UHA3 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Spg11Q3UHA3 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC16.75■□□□□ 0.27
Spg11Q3UHA3 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Spg11Q3UHA3 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Spg11Q3UHA3 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Spg11Q3UHA3 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Spg11Q3UHA3 Snhg20-203ENSMUST00000182811 2153 ntBASIC16.74■□□□□ 0.27
Spg11Q3UHA3 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Spg11Q3UHA3 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Spg11Q3UHA3 Gm23935-201ENSMUST00000102303 57 ntBASIC16.74■□□□□ 0.27
Spg11Q3UHA3 Gm24270-201ENSMUST00000102326 57 ntBASIC16.74■□□□□ 0.27
Spg11Q3UHA3 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC16.74■□□□□ 0.27
Spg11Q3UHA3 Gm24245-201ENSMUST00000157318 57 ntBASIC16.74■□□□□ 0.27
Spg11Q3UHA3 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Spg11Q3UHA3 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC16.74■□□□□ 0.27
Spg11Q3UHA3 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC16.74■□□□□ 0.27
Spg11Q3UHA3 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC16.74■□□□□ 0.27
Spg11Q3UHA3 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Spg11Q3UHA3 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Spg11Q3UHA3 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Spg11Q3UHA3 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Spg11Q3UHA3 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Spg11Q3UHA3 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Spg11Q3UHA3 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Spg11Q3UHA3 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Spg11Q3UHA3 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Spg11Q3UHA3 AC159301.1-201ENSMUST00000225130 1182 ntBASIC16.74■□□□□ 0.27
Spg11Q3UHA3 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Spg11Q3UHA3 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Spg11Q3UHA3 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms