Protein–RNA interactions for Protein: Q3U962

Col5a2, Collagen alpha-2(V) chain, mousemouse

Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a2Q3U962 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Col5a2Q3U962 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Col5a2Q3U962 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC21.65■■□□□ 1.06
Col5a2Q3U962 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
Col5a2Q3U962 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Col5a2Q3U962 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
Col5a2Q3U962 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.06
Col5a2Q3U962 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC21.64■■□□□ 1.06
Col5a2Q3U962 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
Col5a2Q3U962 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Col5a2Q3U962 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Col5a2Q3U962 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC21.64■■□□□ 1.05
Col5a2Q3U962 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Col5a2Q3U962 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Col5a2Q3U962 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC21.64■■□□□ 1.05
Col5a2Q3U962 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Col5a2Q3U962 Gm5587-201ENSMUST00000206270 674 ntBASIC21.64■■□□□ 1.05
Col5a2Q3U962 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Col5a2Q3U962 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Col5a2Q3U962 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
Col5a2Q3U962 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Col5a2Q3U962 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC21.63■■□□□ 1.05
Col5a2Q3U962 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Col5a2Q3U962 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Col5a2Q3U962 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Col5a2Q3U962 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Col5a2Q3U962 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC21.63■■□□□ 1.05
Col5a2Q3U962 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Col5a2Q3U962 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Col5a2Q3U962 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Col5a2Q3U962 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Col5a2Q3U962 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC21.62■■□□□ 1.05
Col5a2Q3U962 Gm27704-201ENSMUST00000185094 107 ntBASIC21.62■■□□□ 1.05
Col5a2Q3U962 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Col5a2Q3U962 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Col5a2Q3U962 Gm7461-201ENSMUST00000058918 827 ntBASIC21.62■■□□□ 1.05
Col5a2Q3U962 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Col5a2Q3U962 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Col5a2Q3U962 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Col5a2Q3U962 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Col5a2Q3U962 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Col5a2Q3U962 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Col5a2Q3U962 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Col5a2Q3U962 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Col5a2Q3U962 Gm7153-201ENSMUST00000117092 455 ntBASIC21.61■■□□□ 1.05
Col5a2Q3U962 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC21.61■■□□□ 1.05
Col5a2Q3U962 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
Col5a2Q3U962 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Col5a2Q3U962 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Col5a2Q3U962 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Col5a2Q3U962 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Col5a2Q3U962 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Col5a2Q3U962 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
Col5a2Q3U962 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Col5a2Q3U962 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC21.6■■□□□ 1.05
Col5a2Q3U962 Gm18669-201ENSMUST00000216049 778 ntBASIC21.6■■□□□ 1.05
Col5a2Q3U962 Gm7370-201ENSMUST00000219471 767 ntBASIC21.6■■□□□ 1.05
Col5a2Q3U962 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Col5a2Q3U962 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Col5a2Q3U962 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Col5a2Q3U962 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
Col5a2Q3U962 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Col5a2Q3U962 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Col5a2Q3U962 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Col5a2Q3U962 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Col5a2Q3U962 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Col5a2Q3U962 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Col5a2Q3U962 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Col5a2Q3U962 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Col5a2Q3U962 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Col5a2Q3U962 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Col5a2Q3U962 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Col5a2Q3U962 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Col5a2Q3U962 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Col5a2Q3U962 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Col5a2Q3U962 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Col5a2Q3U962 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC21.58■■□□□ 1.05
Col5a2Q3U962 Gm17807-201ENSMUST00000186869 298 ntBASIC21.58■■□□□ 1.05
Col5a2Q3U962 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Col5a2Q3U962 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Col5a2Q3U962 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Col5a2Q3U962 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Col5a2Q3U962 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Col5a2Q3U962 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.04
Col5a2Q3U962 Gm29518-201ENSMUST00000190858 372 ntBASIC21.58■■□□□ 1.04
Col5a2Q3U962 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Col5a2Q3U962 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Col5a2Q3U962 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Col5a2Q3U962 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC21.58■■□□□ 1.04
Col5a2Q3U962 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
Col5a2Q3U962 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
Col5a2Q3U962 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
Col5a2Q3U962 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Col5a2Q3U962 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Col5a2Q3U962 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Col5a2Q3U962 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Col5a2Q3U962 Gm9013-201ENSMUST00000132939 882 ntBASIC21.57■■□□□ 1.04
Col5a2Q3U962 Gm27357-201ENSMUST00000183754 135 ntBASIC21.57■■□□□ 1.04
Col5a2Q3U962 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Col5a2Q3U962 Gm44771-201ENSMUST00000206975 626 ntBASIC21.57■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms