Protein–RNA interactions for Protein: Q3TP92

Ctdnep1, CTD nuclear envelope phosphatase 1, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdnep1Q3TP92 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC21■□□□□ 0.95
Ctdnep1Q3TP92 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
Ctdnep1Q3TP92 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ctdnep1Q3TP92 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC21■□□□□ 0.95
Ctdnep1Q3TP92 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ctdnep1Q3TP92 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Ctdnep1Q3TP92 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Ctdnep1Q3TP92 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
Ctdnep1Q3TP92 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
Ctdnep1Q3TP92 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ctdnep1Q3TP92 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Ctdnep1Q3TP92 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
Ctdnep1Q3TP92 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Ctdnep1Q3TP92 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Ctdnep1Q3TP92 Gm26524-201ENSMUST00000192339 390 ntBASIC20.99■□□□□ 0.95
Ctdnep1Q3TP92 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ctdnep1Q3TP92 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Ctdnep1Q3TP92 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Ctdnep1Q3TP92 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Ctdnep1Q3TP92 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Ctdnep1Q3TP92 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ctdnep1Q3TP92 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Ctdnep1Q3TP92 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Ctdnep1Q3TP92 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ctdnep1Q3TP92 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
Ctdnep1Q3TP92 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
Ctdnep1Q3TP92 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Ctdnep1Q3TP92 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ctdnep1Q3TP92 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ctdnep1Q3TP92 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ctdnep1Q3TP92 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ctdnep1Q3TP92 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ctdnep1Q3TP92 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ctdnep1Q3TP92 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ctdnep1Q3TP92 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ctdnep1Q3TP92 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC20.96■□□□□ 0.95
Ctdnep1Q3TP92 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ctdnep1Q3TP92 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Ctdnep1Q3TP92 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ctdnep1Q3TP92 Zcchc6-207ENSMUST00000225576 2499 ntBASIC20.96■□□□□ 0.95
Ctdnep1Q3TP92 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC20.96■□□□□ 0.95
Ctdnep1Q3TP92 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ctdnep1Q3TP92 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Ctdnep1Q3TP92 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC20.96■□□□□ 0.95
Ctdnep1Q3TP92 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC20.96■□□□□ 0.95
Ctdnep1Q3TP92 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ctdnep1Q3TP92 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ctdnep1Q3TP92 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ctdnep1Q3TP92 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ctdnep1Q3TP92 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Ctdnep1Q3TP92 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ctdnep1Q3TP92 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC20.95■□□□□ 0.94
Ctdnep1Q3TP92 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC20.95■□□□□ 0.94
Ctdnep1Q3TP92 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ctdnep1Q3TP92 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Ctdnep1Q3TP92 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ctdnep1Q3TP92 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC20.95■□□□□ 0.94
Ctdnep1Q3TP92 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC20.95■□□□□ 0.94
Ctdnep1Q3TP92 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Ctdnep1Q3TP92 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ctdnep1Q3TP92 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ctdnep1Q3TP92 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ctdnep1Q3TP92 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ctdnep1Q3TP92 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Ctdnep1Q3TP92 Mir5133-201ENSMUST00000174955 77 ntBASIC20.94■□□□□ 0.94
Ctdnep1Q3TP92 AC164629.5-201ENSMUST00000220387 632 ntBASIC20.94■□□□□ 0.94
Ctdnep1Q3TP92 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ctdnep1Q3TP92 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ctdnep1Q3TP92 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC20.94■□□□□ 0.94
Ctdnep1Q3TP92 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ctdnep1Q3TP92 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC20.94■□□□□ 0.94
Ctdnep1Q3TP92 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ctdnep1Q3TP92 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ctdnep1Q3TP92 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC20.93■□□□□ 0.94
Ctdnep1Q3TP92 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ctdnep1Q3TP92 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ctdnep1Q3TP92 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC20.93■□□□□ 0.94
Ctdnep1Q3TP92 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Ctdnep1Q3TP92 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Ctdnep1Q3TP92 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ctdnep1Q3TP92 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ctdnep1Q3TP92 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC20.93■□□□□ 0.94
Ctdnep1Q3TP92 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC20.92■□□□□ 0.94
Ctdnep1Q3TP92 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Ctdnep1Q3TP92 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
Ctdnep1Q3TP92 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
Ctdnep1Q3TP92 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ctdnep1Q3TP92 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ctdnep1Q3TP92 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ctdnep1Q3TP92 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ctdnep1Q3TP92 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC20.92■□□□□ 0.94
Ctdnep1Q3TP92 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ctdnep1Q3TP92 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ctdnep1Q3TP92 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ctdnep1Q3TP92 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ctdnep1Q3TP92 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ctdnep1Q3TP92 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC20.91■□□□□ 0.94
Ctdnep1Q3TP92 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ctdnep1Q3TP92 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ctdnep1Q3TP92 Gm44549-201ENSMUST00000208351 577 ntBASIC20.91■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms