Protein–RNA interactions for Protein: Q3TCH7

Cul4a, Cullin-4A, mousemouse

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cul4aQ3TCH7 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cul4aQ3TCH7 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cul4aQ3TCH7 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cul4aQ3TCH7 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Cul4aQ3TCH7 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cul4aQ3TCH7 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cul4aQ3TCH7 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cul4aQ3TCH7 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cul4aQ3TCH7 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Cul4aQ3TCH7 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cul4aQ3TCH7 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cul4aQ3TCH7 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC19.04■□□□□ 0.64
Cul4aQ3TCH7 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Cul4aQ3TCH7 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cul4aQ3TCH7 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Cul4aQ3TCH7 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cul4aQ3TCH7 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cul4aQ3TCH7 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Cul4aQ3TCH7 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cul4aQ3TCH7 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cul4aQ3TCH7 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cul4aQ3TCH7 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cul4aQ3TCH7 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cul4aQ3TCH7 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cul4aQ3TCH7 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC19.03■□□□□ 0.64
Cul4aQ3TCH7 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Cul4aQ3TCH7 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC19.03■□□□□ 0.64
Cul4aQ3TCH7 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Cul4aQ3TCH7 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Cul4aQ3TCH7 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cul4aQ3TCH7 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC19.03■□□□□ 0.64
Cul4aQ3TCH7 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC19.03■□□□□ 0.64
Cul4aQ3TCH7 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC19.03■□□□□ 0.64
Cul4aQ3TCH7 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Cul4aQ3TCH7 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Cul4aQ3TCH7 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Cul4aQ3TCH7 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Cul4aQ3TCH7 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
Cul4aQ3TCH7 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Cul4aQ3TCH7 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
Cul4aQ3TCH7 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
Cul4aQ3TCH7 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Cul4aQ3TCH7 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Cul4aQ3TCH7 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Cul4aQ3TCH7 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Cul4aQ3TCH7 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC19.02■□□□□ 0.64
Cul4aQ3TCH7 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Cul4aQ3TCH7 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Cul4aQ3TCH7 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cul4aQ3TCH7 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Cul4aQ3TCH7 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Cul4aQ3TCH7 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC19.01■□□□□ 0.63
Cul4aQ3TCH7 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cul4aQ3TCH7 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cul4aQ3TCH7 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Cul4aQ3TCH7 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cul4aQ3TCH7 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC19.01■□□□□ 0.63
Cul4aQ3TCH7 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC19.01■□□□□ 0.63
Cul4aQ3TCH7 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cul4aQ3TCH7 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cul4aQ3TCH7 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cul4aQ3TCH7 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC19■□□□□ 0.63
Cul4aQ3TCH7 Gm6420-201ENSMUST00000193885 723 ntBASIC19■□□□□ 0.63
Cul4aQ3TCH7 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cul4aQ3TCH7 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cul4aQ3TCH7 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cul4aQ3TCH7 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC19■□□□□ 0.63
Cul4aQ3TCH7 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Cul4aQ3TCH7 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Cul4aQ3TCH7 Gm6598-201ENSMUST00000202719 2615 ntBASIC19■□□□□ 0.63
Cul4aQ3TCH7 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cul4aQ3TCH7 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cul4aQ3TCH7 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Cul4aQ3TCH7 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Cul4aQ3TCH7 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cul4aQ3TCH7 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Cul4aQ3TCH7 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC18.99■□□□□ 0.63
Cul4aQ3TCH7 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cul4aQ3TCH7 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cul4aQ3TCH7 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cul4aQ3TCH7 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cul4aQ3TCH7 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cul4aQ3TCH7 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cul4aQ3TCH7 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cul4aQ3TCH7 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
Cul4aQ3TCH7 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC18.99■□□□□ 0.63
Cul4aQ3TCH7 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cul4aQ3TCH7 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC18.99■□□□□ 0.63
Cul4aQ3TCH7 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cul4aQ3TCH7 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cul4aQ3TCH7 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cul4aQ3TCH7 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cul4aQ3TCH7 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cul4aQ3TCH7 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC18.99■□□□□ 0.63
Cul4aQ3TCH7 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Cul4aQ3TCH7 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cul4aQ3TCH7 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cul4aQ3TCH7 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cul4aQ3TCH7 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Cul4aQ3TCH7 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms