Protein–RNA interactions for Protein: Q07424

Cdx4, Homeobox protein CDX-4, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx4Q07424 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cdx4Q07424 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Cdx4Q07424 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cdx4Q07424 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Cdx4Q07424 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC13.99□□□□□ -0.17
Cdx4Q07424 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cdx4Q07424 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Cdx4Q07424 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
Cdx4Q07424 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC13.99□□□□□ -0.17
Cdx4Q07424 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cdx4Q07424 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cdx4Q07424 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cdx4Q07424 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cdx4Q07424 Gm43182-201ENSMUST00000199476 2528 ntBASIC13.99□□□□□ -0.17
Cdx4Q07424 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cdx4Q07424 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cdx4Q07424 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Cdx4Q07424 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cdx4Q07424 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cdx4Q07424 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cdx4Q07424 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Cdx4Q07424 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cdx4Q07424 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Cdx4Q07424 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cdx4Q07424 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC13.98□□□□□ -0.17
Cdx4Q07424 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cdx4Q07424 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cdx4Q07424 Gm5408-201ENSMUST00000197998 747 ntBASIC13.98□□□□□ -0.17
Cdx4Q07424 Gm6365-201ENSMUST00000054711 744 ntBASIC13.98□□□□□ -0.17
Cdx4Q07424 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Cdx4Q07424 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Cdx4Q07424 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Cdx4Q07424 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cdx4Q07424 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cdx4Q07424 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cdx4Q07424 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cdx4Q07424 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cdx4Q07424 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Cdx4Q07424 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Cdx4Q07424 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC13.98□□□□□ -0.17
Cdx4Q07424 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cdx4Q07424 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
Cdx4Q07424 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Cdx4Q07424 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Cdx4Q07424 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cdx4Q07424 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cdx4Q07424 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cdx4Q07424 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cdx4Q07424 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Cdx4Q07424 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC13.97□□□□□ -0.17
Cdx4Q07424 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC13.97□□□□□ -0.17
Cdx4Q07424 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
Cdx4Q07424 Gm12669-201ENSMUST00000122162 1009 ntBASIC13.97□□□□□ -0.17
Cdx4Q07424 Nespas-201ENSMUST00000143738 1083 ntBASIC13.97□□□□□ -0.17
Cdx4Q07424 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Cdx4Q07424 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC13.97□□□□□ -0.17
Cdx4Q07424 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC13.97□□□□□ -0.17
Cdx4Q07424 Gm27011-201ENSMUST00000182352 972 ntBASIC13.97□□□□□ -0.17
Cdx4Q07424 Gm6420-201ENSMUST00000193885 723 ntBASIC13.97□□□□□ -0.17
Cdx4Q07424 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC13.97□□□□□ -0.17
Cdx4Q07424 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cdx4Q07424 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Cdx4Q07424 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cdx4Q07424 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cdx4Q07424 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cdx4Q07424 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Cdx4Q07424 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC13.97□□□□□ -0.17
Cdx4Q07424 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cdx4Q07424 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Cdx4Q07424 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Cdx4Q07424 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
Cdx4Q07424 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC13.96□□□□□ -0.17
Cdx4Q07424 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Cdx4Q07424 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cdx4Q07424 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cdx4Q07424 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Cdx4Q07424 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Cdx4Q07424 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cdx4Q07424 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC13.96□□□□□ -0.17
Cdx4Q07424 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cdx4Q07424 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cdx4Q07424 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.18
Cdx4Q07424 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.18
Cdx4Q07424 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC13.96□□□□□ -0.18
Cdx4Q07424 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Cdx4Q07424 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Cdx4Q07424 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Cdx4Q07424 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Cdx4Q07424 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Cdx4Q07424 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cdx4Q07424 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cdx4Q07424 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cdx4Q07424 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Cdx4Q07424 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cdx4Q07424 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cdx4Q07424 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cdx4Q07424 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC13.95□□□□□ -0.18
Cdx4Q07424 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Cdx4Q07424 Gm13534-201ENSMUST00000121169 513 ntBASIC13.95□□□□□ -0.18
Cdx4Q07424 Gm12441-201ENSMUST00000121806 588 ntBASIC13.95□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms