Protein–RNA interactions for Protein: P97471

Smad4, Mothers against decapentaplegic homolog 4, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smad4P97471 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
Smad4P97471 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
Smad4P97471 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Smad4P97471 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Smad4P97471 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Smad4P97471 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Smad4P97471 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
Smad4P97471 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Smad4P97471 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Smad4P97471 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Smad4P97471 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Smad4P97471 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Smad4P97471 AC126028.2-201ENSMUST00000228100 1833 ntBASIC18.22■□□□□ 0.51
Smad4P97471 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Smad4P97471 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Smad4P97471 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC18.22■□□□□ 0.51
Smad4P97471 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Smad4P97471 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC18.22■□□□□ 0.51
Smad4P97471 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Smad4P97471 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Smad4P97471 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC18.21■□□□□ 0.51
Smad4P97471 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Smad4P97471 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Smad4P97471 Mir1668-201ENSMUST00000184114 107 ntBASIC18.21■□□□□ 0.51
Smad4P97471 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Smad4P97471 Gm4974-201ENSMUST00000209974 875 ntBASIC18.21■□□□□ 0.51
Smad4P97471 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Smad4P97471 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Smad4P97471 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Smad4P97471 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC18.2■□□□□ 0.5
Smad4P97471 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC18.2■□□□□ 0.5
Smad4P97471 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
Smad4P97471 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC18.2■□□□□ 0.5
Smad4P97471 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Smad4P97471 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Smad4P97471 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Smad4P97471 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Smad4P97471 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC18.2■□□□□ 0.5
Smad4P97471 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Smad4P97471 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Smad4P97471 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Smad4P97471 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC18.19■□□□□ 0.5
Smad4P97471 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Smad4P97471 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Smad4P97471 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Smad4P97471 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC18.19■□□□□ 0.5
Smad4P97471 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC18.19■□□□□ 0.5
Smad4P97471 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC18.19■□□□□ 0.5
Smad4P97471 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Smad4P97471 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC18.19■□□□□ 0.5
Smad4P97471 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Smad4P97471 Gm6443-201ENSMUST00000203599 874 ntBASIC18.19■□□□□ 0.5
Smad4P97471 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Smad4P97471 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Smad4P97471 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Smad4P97471 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Smad4P97471 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Smad4P97471 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Smad4P97471 Mir3081-201ENSMUST00000175305 84 ntBASIC18.18■□□□□ 0.5
Smad4P97471 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC18.18■□□□□ 0.5
Smad4P97471 Gm37805-201ENSMUST00000192612 1094 ntBASIC18.18■□□□□ 0.5
Smad4P97471 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Smad4P97471 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Smad4P97471 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Smad4P97471 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Smad4P97471 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Smad4P97471 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Smad4P97471 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Smad4P97471 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
Smad4P97471 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Smad4P97471 Gm24589-201ENSMUST00000116692 94 ntBASIC18.17■□□□□ 0.5
Smad4P97471 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Smad4P97471 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Smad4P97471 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Smad4P97471 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Smad4P97471 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Smad4P97471 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC18.16■□□□□ 0.5
Smad4P97471 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Smad4P97471 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Smad4P97471 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Smad4P97471 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Smad4P97471 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Smad4P97471 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC18.16■□□□□ 0.5
Smad4P97471 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Smad4P97471 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC18.16■□□□□ 0.5
Smad4P97471 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC18.16■□□□□ 0.5
Smad4P97471 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Smad4P97471 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC18.16■□□□□ 0.5
Smad4P97471 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC18.16■□□□□ 0.5
Smad4P97471 Gm7791-201ENSMUST00000219066 539 ntBASIC18.16■□□□□ 0.5
Smad4P97471 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Smad4P97471 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Smad4P97471 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC18.16■□□□□ 0.5
Smad4P97471 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
Smad4P97471 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Smad4P97471 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Smad4P97471 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Smad4P97471 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Smad4P97471 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Smad4P97471 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms