Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
PrkdcP97313 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC12.53□□□□□ -0.4
PrkdcP97313 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
PrkdcP97313 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
PrkdcP97313 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
PrkdcP97313 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
PrkdcP97313 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
PrkdcP97313 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC12.53□□□□□ -0.4
PrkdcP97313 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
PrkdcP97313 Gm13884-201ENSMUST00000118103 829 ntBASIC12.53□□□□□ -0.4
PrkdcP97313 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
PrkdcP97313 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC12.53□□□□□ -0.4
PrkdcP97313 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC12.53□□□□□ -0.4
PrkdcP97313 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
PrkdcP97313 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC12.53□□□□□ -0.4
PrkdcP97313 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
PrkdcP97313 Gm9449-201ENSMUST00000207265 1011 ntBASIC12.53□□□□□ -0.4
PrkdcP97313 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
PrkdcP97313 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC12.52□□□□□ -0.4
PrkdcP97313 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC12.52□□□□□ -0.4
PrkdcP97313 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
PrkdcP97313 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
PrkdcP97313 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
PrkdcP97313 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
PrkdcP97313 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
PrkdcP97313 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
PrkdcP97313 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
PrkdcP97313 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
PrkdcP97313 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
PrkdcP97313 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC12.52□□□□□ -0.4
PrkdcP97313 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
PrkdcP97313 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC12.52□□□□□ -0.41
PrkdcP97313 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC12.52□□□□□ -0.41
PrkdcP97313 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
PrkdcP97313 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC12.52□□□□□ -0.41
PrkdcP97313 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC12.52□□□□□ -0.41
PrkdcP97313 Gm2651-201ENSMUST00000203560 838 ntBASIC12.52□□□□□ -0.41
PrkdcP97313 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
PrkdcP97313 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
PrkdcP97313 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
PrkdcP97313 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
PrkdcP97313 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
PrkdcP97313 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
PrkdcP97313 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
PrkdcP97313 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
PrkdcP97313 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
PrkdcP97313 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
PrkdcP97313 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC12.51□□□□□ -0.41
PrkdcP97313 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
PrkdcP97313 Mir1668-201ENSMUST00000184114 107 ntBASIC12.51□□□□□ -0.41
PrkdcP97313 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
PrkdcP97313 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
PrkdcP97313 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
PrkdcP97313 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
PrkdcP97313 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
PrkdcP97313 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
PrkdcP97313 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
PrkdcP97313 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
PrkdcP97313 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
PrkdcP97313 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC12.51□□□□□ -0.41
PrkdcP97313 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
PrkdcP97313 Gm45640-201ENSMUST00000210665 1896 ntBASIC12.51□□□□□ -0.41
PrkdcP97313 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
PrkdcP97313 Gm7213-201ENSMUST00000215977 950 ntBASIC12.51□□□□□ -0.41
PrkdcP97313 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
PrkdcP97313 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
PrkdcP97313 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC12.51□□□□□ -0.41
PrkdcP97313 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
PrkdcP97313 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
PrkdcP97313 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
PrkdcP97313 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC12.5□□□□□ -0.41
PrkdcP97313 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
PrkdcP97313 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
PrkdcP97313 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC12.5□□□□□ -0.41
PrkdcP97313 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
PrkdcP97313 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
PrkdcP97313 Gm13474-201ENSMUST00000122466 815 ntBASIC12.5□□□□□ -0.41
PrkdcP97313 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
PrkdcP97313 Gm27389-201ENSMUST00000183622 195 ntBASIC12.5□□□□□ -0.41
PrkdcP97313 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
PrkdcP97313 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
PrkdcP97313 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
PrkdcP97313 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
PrkdcP97313 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
PrkdcP97313 Gm18733-201ENSMUST00000173950 856 ntBASIC12.5□□□□□ -0.41
PrkdcP97313 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC12.5□□□□□ -0.41
PrkdcP97313 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
PrkdcP97313 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
PrkdcP97313 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
PrkdcP97313 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
PrkdcP97313 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
PrkdcP97313 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
PrkdcP97313 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
PrkdcP97313 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
PrkdcP97313 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
PrkdcP97313 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC12.49□□□□□ -0.41
PrkdcP97313 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC12.49□□□□□ -0.41
PrkdcP97313 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
PrkdcP97313 AC159093.1-201ENSMUST00000227779 380 ntBASIC12.49□□□□□ -0.41
PrkdcP97313 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms