Protein–RNA interactions for Protein: P86448

Trim43b, Tripartite motif-containing protein 43B, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43bP86448 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC18.6■□□□□ 0.57
Trim43bP86448 Gm12933-201ENSMUST00000120203 872 ntBASIC18.6■□□□□ 0.57
Trim43bP86448 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trim43bP86448 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trim43bP86448 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trim43bP86448 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trim43bP86448 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
Trim43bP86448 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Trim43bP86448 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trim43bP86448 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Trim43bP86448 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Trim43bP86448 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trim43bP86448 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC18.59■□□□□ 0.57
Trim43bP86448 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trim43bP86448 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC18.59■□□□□ 0.57
Trim43bP86448 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Trim43bP86448 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Trim43bP86448 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trim43bP86448 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trim43bP86448 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trim43bP86448 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Trim43bP86448 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Trim43bP86448 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
Trim43bP86448 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
Trim43bP86448 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC18.59■□□□□ 0.57
Trim43bP86448 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC18.59■□□□□ 0.57
Trim43bP86448 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC18.59■□□□□ 0.57
Trim43bP86448 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trim43bP86448 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trim43bP86448 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trim43bP86448 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trim43bP86448 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC18.59■□□□□ 0.57
Trim43bP86448 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trim43bP86448 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Trim43bP86448 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Trim43bP86448 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Trim43bP86448 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Trim43bP86448 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Trim43bP86448 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Trim43bP86448 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Trim43bP86448 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Trim43bP86448 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC18.58■□□□□ 0.56
Trim43bP86448 Gm7514-201ENSMUST00000209475 934 ntBASIC18.58■□□□□ 0.56
Trim43bP86448 CT030146.1-201ENSMUST00000220919 217 ntBASIC18.58■□□□□ 0.56
Trim43bP86448 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC18.58■□□□□ 0.56
Trim43bP86448 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC18.58■□□□□ 0.56
Trim43bP86448 Fcho2-208ENSMUST00000224992 2964 ntBASIC18.58■□□□□ 0.56
Trim43bP86448 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Trim43bP86448 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Trim43bP86448 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Trim43bP86448 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Trim43bP86448 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Trim43bP86448 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Trim43bP86448 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Trim43bP86448 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trim43bP86448 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trim43bP86448 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC18.57■□□□□ 0.56
Trim43bP86448 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC18.57■□□□□ 0.56
Trim43bP86448 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trim43bP86448 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Trim43bP86448 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trim43bP86448 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trim43bP86448 Gm13146-201ENSMUST00000118508 780 ntBASIC18.57■□□□□ 0.56
Trim43bP86448 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Trim43bP86448 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Trim43bP86448 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Trim43bP86448 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Trim43bP86448 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trim43bP86448 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC18.57■□□□□ 0.56
Trim43bP86448 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Trim43bP86448 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trim43bP86448 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Trim43bP86448 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC18.57■□□□□ 0.56
Trim43bP86448 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Trim43bP86448 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trim43bP86448 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trim43bP86448 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Trim43bP86448 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Trim43bP86448 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trim43bP86448 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trim43bP86448 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trim43bP86448 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trim43bP86448 Gm5898-201ENSMUST00000121016 2071 ntBASIC18.56■□□□□ 0.56
Trim43bP86448 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trim43bP86448 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trim43bP86448 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Trim43bP86448 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Trim43bP86448 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC18.56■□□□□ 0.56
Trim43bP86448 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Trim43bP86448 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trim43bP86448 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trim43bP86448 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Trim43bP86448 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trim43bP86448 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trim43bP86448 Zcchc6-207ENSMUST00000225576 2499 ntBASIC18.56■□□□□ 0.56
Trim43bP86448 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trim43bP86448 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trim43bP86448 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Trim43bP86448 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trim43bP86448 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms