Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SgcbP82349 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
SgcbP82349 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
SgcbP82349 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SgcbP82349 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SgcbP82349 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SgcbP82349 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SgcbP82349 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SgcbP82349 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC16.19■□□□□ 0.18
SgcbP82349 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SgcbP82349 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SgcbP82349 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SgcbP82349 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
SgcbP82349 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SgcbP82349 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SgcbP82349 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC16.18■□□□□ 0.18
SgcbP82349 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC16.18■□□□□ 0.18
SgcbP82349 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
SgcbP82349 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SgcbP82349 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC16.18■□□□□ 0.18
SgcbP82349 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SgcbP82349 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC16.18■□□□□ 0.18
SgcbP82349 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC16.18■□□□□ 0.18
SgcbP82349 Gm37805-201ENSMUST00000192612 1094 ntBASIC16.18■□□□□ 0.18
SgcbP82349 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SgcbP82349 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
SgcbP82349 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
SgcbP82349 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
SgcbP82349 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
SgcbP82349 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SgcbP82349 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SgcbP82349 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SgcbP82349 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SgcbP82349 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
SgcbP82349 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SgcbP82349 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SgcbP82349 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SgcbP82349 AC140264.2-202ENSMUST00000218746 817 ntBASIC16.17■□□□□ 0.18
SgcbP82349 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
SgcbP82349 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
SgcbP82349 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
SgcbP82349 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
SgcbP82349 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SgcbP82349 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
SgcbP82349 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
SgcbP82349 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
SgcbP82349 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SgcbP82349 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
SgcbP82349 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
SgcbP82349 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC16.16■□□□□ 0.18
SgcbP82349 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SgcbP82349 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SgcbP82349 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SgcbP82349 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SgcbP82349 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
SgcbP82349 Gm5784-201ENSMUST00000179344 2478 ntBASIC16.16■□□□□ 0.18
SgcbP82349 Gm2399-201ENSMUST00000104944 225 ntBASIC16.16■□□□□ 0.18
SgcbP82349 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
SgcbP82349 Gm20049-201ENSMUST00000219950 730 ntBASIC16.16■□□□□ 0.18
SgcbP82349 AC112142.1-201ENSMUST00000228796 918 ntBASIC16.16■□□□□ 0.18
SgcbP82349 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SgcbP82349 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SgcbP82349 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SgcbP82349 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
SgcbP82349 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SgcbP82349 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
SgcbP82349 Gm7856-201ENSMUST00000117514 1493 ntBASIC16.16■□□□□ 0.18
SgcbP82349 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SgcbP82349 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
SgcbP82349 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SgcbP82349 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC16.15■□□□□ 0.18
SgcbP82349 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
SgcbP82349 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
SgcbP82349 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SgcbP82349 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SgcbP82349 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC16.15■□□□□ 0.18
SgcbP82349 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SgcbP82349 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
SgcbP82349 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC16.15■□□□□ 0.18
SgcbP82349 Gm12896-201ENSMUST00000118430 226 ntBASIC16.15■□□□□ 0.18
SgcbP82349 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC16.15■□□□□ 0.18
SgcbP82349 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SgcbP82349 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC16.15■□□□□ 0.18
SgcbP82349 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SgcbP82349 Gm15853-202ENSMUST00000195518 2041 ntBASIC16.15■□□□□ 0.18
SgcbP82349 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC16.15■□□□□ 0.18
SgcbP82349 AC107452.1-201ENSMUST00000227963 481 ntBASIC16.15■□□□□ 0.18
SgcbP82349 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC16.15■□□□□ 0.18
SgcbP82349 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC16.15■□□□□ 0.18
SgcbP82349 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SgcbP82349 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
SgcbP82349 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
SgcbP82349 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SgcbP82349 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SgcbP82349 Gm9885-202ENSMUST00000186234 2209 ntBASIC16.14■□□□□ 0.17
SgcbP82349 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC16.14■□□□□ 0.17
SgcbP82349 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
SgcbP82349 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SgcbP82349 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC16.14■□□□□ 0.17
SgcbP82349 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms