Protein–RNA interactions for Protein: P70279

Surf6, Surfeit locus protein 6, mousemouse

Known RBP Predictions only

Length 355 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Surf6P70279 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Surf6P70279 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Surf6P70279 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Surf6P70279 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Surf6P70279 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Surf6P70279 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Surf6P70279 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Surf6P70279 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Surf6P70279 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Surf6P70279 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Surf6P70279 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Surf6P70279 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Surf6P70279 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Surf6P70279 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Surf6P70279 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
Surf6P70279 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Surf6P70279 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Surf6P70279 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC18.8■□□□□ 0.6
Surf6P70279 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Surf6P70279 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Surf6P70279 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Surf6P70279 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Surf6P70279 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Surf6P70279 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Surf6P70279 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Surf6P70279 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC18.8■□□□□ 0.6
Surf6P70279 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Surf6P70279 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC18.8■□□□□ 0.6
Surf6P70279 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Surf6P70279 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Surf6P70279 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Surf6P70279 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Surf6P70279 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Surf6P70279 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC18.79■□□□□ 0.6
Surf6P70279 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Surf6P70279 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Surf6P70279 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Surf6P70279 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Surf6P70279 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC18.79■□□□□ 0.6
Surf6P70279 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
Surf6P70279 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Surf6P70279 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Surf6P70279 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Surf6P70279 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Surf6P70279 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC18.79■□□□□ 0.6
Surf6P70279 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Surf6P70279 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Surf6P70279 Gm37194-201ENSMUST00000193092 3031 ntBASIC18.79■□□□□ 0.6
Surf6P70279 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Surf6P70279 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Surf6P70279 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Surf6P70279 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Surf6P70279 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Surf6P70279 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Surf6P70279 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Surf6P70279 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Surf6P70279 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Surf6P70279 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Surf6P70279 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
Surf6P70279 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Surf6P70279 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Surf6P70279 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
Surf6P70279 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Surf6P70279 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Surf6P70279 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Surf6P70279 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Surf6P70279 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC18.77■□□□□ 0.6
Surf6P70279 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Surf6P70279 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Surf6P70279 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Surf6P70279 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Surf6P70279 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Surf6P70279 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC18.77■□□□□ 0.6
Surf6P70279 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Surf6P70279 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Surf6P70279 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Surf6P70279 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Surf6P70279 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Surf6P70279 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Surf6P70279 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Surf6P70279 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Surf6P70279 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Surf6P70279 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Surf6P70279 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Surf6P70279 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Surf6P70279 Gm27454-201ENSMUST00000185090 204 ntBASIC18.76■□□□□ 0.59
Surf6P70279 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Surf6P70279 Gm43808-201ENSMUST00000202534 2065 ntBASIC18.76■□□□□ 0.59
Surf6P70279 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Surf6P70279 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Surf6P70279 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Surf6P70279 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Surf6P70279 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Surf6P70279 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Surf6P70279 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC18.76■□□□□ 0.59
Surf6P70279 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Surf6P70279 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Surf6P70279 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Surf6P70279 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Surf6P70279 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms