Protein–RNA interactions for Protein: P70271

Pdlim4, PDZ and LIM domain protein 4, mousemouse

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim4P70271 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Pdlim4P70271 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pdlim4P70271 Gm13509-201ENSMUST00000119733 1308 ntBASIC15.07■□□□□ 0
Pdlim4P70271 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pdlim4P70271 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC15.07■□□□□ 0
Pdlim4P70271 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pdlim4P70271 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pdlim4P70271 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Pdlim4P70271 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
Pdlim4P70271 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC15.06■□□□□ 0
Pdlim4P70271 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Pdlim4P70271 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Pdlim4P70271 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC15.06■□□□□ 0
Pdlim4P70271 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC15.06■□□□□ 0
Pdlim4P70271 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC15.06■□□□□ 0
Pdlim4P70271 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Pdlim4P70271 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC15.06■□□□□ 0
Pdlim4P70271 Gm3807-201ENSMUST00000193520 1168 ntBASIC15.06■□□□□ 0
Pdlim4P70271 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC15.06■□□□□ 0
Pdlim4P70271 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC15.06■□□□□ 0
Pdlim4P70271 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC15.06■□□□□ 0
Pdlim4P70271 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Pdlim4P70271 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Pdlim4P70271 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Pdlim4P70271 Gm9885-202ENSMUST00000186234 2209 ntBASIC15.06■□□□□ 0
Pdlim4P70271 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Pdlim4P70271 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Pdlim4P70271 Gm44832-201ENSMUST00000208849 2303 ntBASIC15.06■□□□□ 0
Pdlim4P70271 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Pdlim4P70271 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Pdlim4P70271 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Pdlim4P70271 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Pdlim4P70271 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Pdlim4P70271 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Pdlim4P70271 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Pdlim4P70271 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Pdlim4P70271 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Pdlim4P70271 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
Pdlim4P70271 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ 0
Pdlim4P70271 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Pdlim4P70271 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Pdlim4P70271 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
Pdlim4P70271 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC15.05■□□□□ -0
Pdlim4P70271 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC15.05■□□□□ -0
Pdlim4P70271 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC15.05■□□□□ -0
Pdlim4P70271 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC15.05■□□□□ -0
Pdlim4P70271 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Pdlim4P70271 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC15.05■□□□□ -0
Pdlim4P70271 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Pdlim4P70271 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Pdlim4P70271 Gm35558-201ENSMUST00000222675 2219 ntBASIC15.05■□□□□ -0
Pdlim4P70271 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Pdlim4P70271 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Pdlim4P70271 Grk6-206ENSMUST00000224995 2971 ntBASIC15.05■□□□□ -0
Pdlim4P70271 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Pdlim4P70271 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Pdlim4P70271 Gm43231-201ENSMUST00000202960 2258 ntBASIC15.04■□□□□ -0
Pdlim4P70271 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Pdlim4P70271 Gm15853-202ENSMUST00000195518 2041 ntBASIC15.04■□□□□ -0
Pdlim4P70271 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Pdlim4P70271 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC15.04■□□□□ -0
Pdlim4P70271 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC15.04■□□□□ -0
Pdlim4P70271 Gm43672-201ENSMUST00000199072 1731 ntBASIC15.04■□□□□ -0
Pdlim4P70271 Gm37563-201ENSMUST00000192580 1513 ntBASIC15.04■□□□□ -0
Pdlim4P70271 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Pdlim4P70271 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
Pdlim4P70271 Gm29257-201ENSMUST00000186115 639 ntBASIC15.04■□□□□ -0
Pdlim4P70271 Gm5408-201ENSMUST00000197998 747 ntBASIC15.04■□□□□ -0
Pdlim4P70271 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC15.04■□□□□ -0
Pdlim4P70271 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Pdlim4P70271 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Pdlim4P70271 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Pdlim4P70271 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Pdlim4P70271 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Pdlim4P70271 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC15.04■□□□□ -0
Pdlim4P70271 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Pdlim4P70271 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC15.03■□□□□ -0
Pdlim4P70271 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC15.03■□□□□ -0
Pdlim4P70271 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Pdlim4P70271 Gm13148-201ENSMUST00000118892 745 ntBASIC15.03■□□□□ -0
Pdlim4P70271 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC15.03■□□□□ -0
Pdlim4P70271 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Pdlim4P70271 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC15.03■□□□□ -0
Pdlim4P70271 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC15.03■□□□□ -0
Pdlim4P70271 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pdlim4P70271 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pdlim4P70271 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Pdlim4P70271 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC15.03■□□□□ -0
Pdlim4P70271 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pdlim4P70271 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC15.02■□□□□ -0
Pdlim4P70271 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC15.02■□□□□ -0
Pdlim4P70271 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Pdlim4P70271 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC15.02■□□□□ -0
Pdlim4P70271 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Pdlim4P70271 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC15.02■□□□□ -0
Pdlim4P70271 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC15.02■□□□□ -0
Pdlim4P70271 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC15.02■□□□□ -0
Pdlim4P70271 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Pdlim4P70271 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Pdlim4P70271 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms