Protein–RNA interactions for Protein: P63154

Crnkl1, Crooked neck-like protein 1, mousemouse

Known RBP Predictions only

Length 690 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crnkl1P63154 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC17.94■□□□□ 0.46
Crnkl1P63154 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Crnkl1P63154 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Crnkl1P63154 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC17.93■□□□□ 0.46
Crnkl1P63154 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Crnkl1P63154 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Crnkl1P63154 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Crnkl1P63154 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Crnkl1P63154 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Crnkl1P63154 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Crnkl1P63154 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Crnkl1P63154 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Crnkl1P63154 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Crnkl1P63154 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Crnkl1P63154 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Crnkl1P63154 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Crnkl1P63154 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Crnkl1P63154 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Crnkl1P63154 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Crnkl1P63154 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Crnkl1P63154 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Crnkl1P63154 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Crnkl1P63154 Gm15743-202ENSMUST00000182690 1901 ntBASIC17.92■□□□□ 0.46
Crnkl1P63154 Gm43294-201ENSMUST00000202850 2490 ntBASIC17.92■□□□□ 0.46
Crnkl1P63154 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Crnkl1P63154 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Crnkl1P63154 Gm10209-201ENSMUST00000203397 1607 ntBASIC17.92■□□□□ 0.46
Crnkl1P63154 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Crnkl1P63154 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Crnkl1P63154 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Crnkl1P63154 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Crnkl1P63154 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Crnkl1P63154 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Crnkl1P63154 Gm45906-201ENSMUST00000208911 1430 ntBASIC17.91■□□□□ 0.46
Crnkl1P63154 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Crnkl1P63154 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Crnkl1P63154 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Crnkl1P63154 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Crnkl1P63154 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Crnkl1P63154 Gm8493-201ENSMUST00000196881 489 ntBASIC17.91■□□□□ 0.46
Crnkl1P63154 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Crnkl1P63154 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC17.91■□□□□ 0.46
Crnkl1P63154 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Crnkl1P63154 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Crnkl1P63154 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Crnkl1P63154 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Crnkl1P63154 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Crnkl1P63154 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Crnkl1P63154 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Crnkl1P63154 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Crnkl1P63154 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Crnkl1P63154 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Crnkl1P63154 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Crnkl1P63154 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Crnkl1P63154 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Crnkl1P63154 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Crnkl1P63154 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Crnkl1P63154 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Crnkl1P63154 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC17.9■□□□□ 0.46
Crnkl1P63154 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Crnkl1P63154 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Crnkl1P63154 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Crnkl1P63154 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC17.89■□□□□ 0.45
Crnkl1P63154 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Crnkl1P63154 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC17.89■□□□□ 0.45
Crnkl1P63154 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
Crnkl1P63154 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC17.89■□□□□ 0.45
Crnkl1P63154 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Crnkl1P63154 Wdr70-203ENSMUST00000227371 1130 ntBASIC17.89■□□□□ 0.45
Crnkl1P63154 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Crnkl1P63154 Gm6139-201ENSMUST00000079261 882 ntBASIC17.89■□□□□ 0.45
Crnkl1P63154 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Crnkl1P63154 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Crnkl1P63154 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Crnkl1P63154 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Crnkl1P63154 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Crnkl1P63154 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Crnkl1P63154 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Crnkl1P63154 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Crnkl1P63154 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Crnkl1P63154 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Crnkl1P63154 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Crnkl1P63154 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Crnkl1P63154 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Crnkl1P63154 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC17.88■□□□□ 0.45
Crnkl1P63154 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
Crnkl1P63154 Spcs1-204ENSMUST00000226782 949 ntBASIC17.88■□□□□ 0.45
Crnkl1P63154 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC17.88■□□□□ 0.45
Crnkl1P63154 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Crnkl1P63154 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Crnkl1P63154 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Crnkl1P63154 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Crnkl1P63154 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Crnkl1P63154 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Crnkl1P63154 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Crnkl1P63154 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Crnkl1P63154 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Crnkl1P63154 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Crnkl1P63154 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Crnkl1P63154 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms