Protein–RNA interactions for Protein: P63006

Lhx1, LIM/homeobox protein Lhx1, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx1P63006 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Lhx1P63006 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Lhx1P63006 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Lhx1P63006 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Lhx1P63006 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Lhx1P63006 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Lhx1P63006 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Lhx1P63006 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
Lhx1P63006 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC17.81■□□□□ 0.44
Lhx1P63006 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC17.81■□□□□ 0.44
Lhx1P63006 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Lhx1P63006 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Lhx1P63006 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Lhx1P63006 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Lhx1P63006 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Lhx1P63006 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Lhx1P63006 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Lhx1P63006 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Lhx1P63006 Gm38345-201ENSMUST00000192635 1748 ntBASIC17.81■□□□□ 0.44
Lhx1P63006 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Lhx1P63006 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Lhx1P63006 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Lhx1P63006 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Lhx1P63006 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Lhx1P63006 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Lhx1P63006 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Lhx1P63006 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC17.8■□□□□ 0.44
Lhx1P63006 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Lhx1P63006 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC17.8■□□□□ 0.44
Lhx1P63006 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC17.8■□□□□ 0.44
Lhx1P63006 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Lhx1P63006 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Lhx1P63006 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Lhx1P63006 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC17.8■□□□□ 0.44
Lhx1P63006 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Lhx1P63006 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Lhx1P63006 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Lhx1P63006 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Lhx1P63006 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Lhx1P63006 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Lhx1P63006 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC17.79■□□□□ 0.44
Lhx1P63006 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Lhx1P63006 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Lhx1P63006 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Lhx1P63006 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC17.79■□□□□ 0.44
Lhx1P63006 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Lhx1P63006 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Lhx1P63006 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Lhx1P63006 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Lhx1P63006 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Lhx1P63006 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Lhx1P63006 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Lhx1P63006 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Lhx1P63006 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Lhx1P63006 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC17.79■□□□□ 0.44
Lhx1P63006 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Lhx1P63006 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Lhx1P63006 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC17.78■□□□□ 0.44
Lhx1P63006 Gm10616-201ENSMUST00000205285 2127 ntBASIC17.78■□□□□ 0.44
Lhx1P63006 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC17.78■□□□□ 0.44
Lhx1P63006 Gm6627-201ENSMUST00000218299 2386 ntBASIC17.78■□□□□ 0.44
Lhx1P63006 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Lhx1P63006 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC17.78■□□□□ 0.44
Lhx1P63006 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC17.78■□□□□ 0.44
Lhx1P63006 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Lhx1P63006 Mir6349-201ENSMUST00000184059 97 ntBASIC17.78■□□□□ 0.44
Lhx1P63006 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Lhx1P63006 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Lhx1P63006 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Lhx1P63006 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Lhx1P63006 Gm42922-201ENSMUST00000195887 2078 ntBASIC17.78■□□□□ 0.44
Lhx1P63006 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC17.77■□□□□ 0.44
Lhx1P63006 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Lhx1P63006 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Lhx1P63006 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Lhx1P63006 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Lhx1P63006 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC17.77■□□□□ 0.44
Lhx1P63006 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC17.77■□□□□ 0.44
Lhx1P63006 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.44
Lhx1P63006 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Lhx1P63006 Gm15375-201ENSMUST00000119510 849 ntBASIC17.77■□□□□ 0.44
Lhx1P63006 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Lhx1P63006 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC17.77■□□□□ 0.44
Lhx1P63006 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC17.77■□□□□ 0.44
Lhx1P63006 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC17.77■□□□□ 0.44
Lhx1P63006 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Lhx1P63006 Gm38308-201ENSMUST00000194934 1809 ntBASIC17.77■□□□□ 0.43
Lhx1P63006 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Lhx1P63006 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Lhx1P63006 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Lhx1P63006 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Lhx1P63006 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Lhx1P63006 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Lhx1P63006 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Lhx1P63006 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Lhx1P63006 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC17.76■□□□□ 0.43
Lhx1P63006 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Lhx1P63006 Gm10698-201ENSMUST00000182663 604 ntBASIC17.76■□□□□ 0.43
Lhx1P63006 AC154649.1-201ENSMUST00000227392 384 ntBASIC17.76■□□□□ 0.43
Lhx1P63006 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms