Protein–RNA interactions for Protein: P62313

Lsm6, U6 snRNA-associated Sm-like protein LSm6, mousemouse

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm6P62313 Gm6211-202ENSMUST00000167849 925 ntBASIC15.89■□□□□ 0.13
Lsm6P62313 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC15.89■□□□□ 0.13
Lsm6P62313 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Lsm6P62313 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Lsm6P62313 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Lsm6P62313 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Lsm6P62313 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Lsm6P62313 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
Lsm6P62313 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Lsm6P62313 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Lsm6P62313 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Lsm6P62313 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC15.88■□□□□ 0.13
Lsm6P62313 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Lsm6P62313 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Lsm6P62313 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC15.88■□□□□ 0.13
Lsm6P62313 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC15.88■□□□□ 0.13
Lsm6P62313 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC15.88■□□□□ 0.13
Lsm6P62313 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC15.88■□□□□ 0.13
Lsm6P62313 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC15.88■□□□□ 0.13
Lsm6P62313 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC15.88■□□□□ 0.13
Lsm6P62313 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC15.88■□□□□ 0.13
Lsm6P62313 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Lsm6P62313 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Lsm6P62313 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Lsm6P62313 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Lsm6P62313 Gm38345-201ENSMUST00000192635 1748 ntBASIC15.88■□□□□ 0.13
Lsm6P62313 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Lsm6P62313 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Lsm6P62313 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC15.87■□□□□ 0.13
Lsm6P62313 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Lsm6P62313 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Lsm6P62313 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Lsm6P62313 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC15.87■□□□□ 0.13
Lsm6P62313 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC15.87■□□□□ 0.13
Lsm6P62313 Gm15039-201ENSMUST00000118914 875 ntBASIC15.87■□□□□ 0.13
Lsm6P62313 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Lsm6P62313 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Lsm6P62313 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Lsm6P62313 Gm37563-201ENSMUST00000192580 1513 ntBASIC15.87■□□□□ 0.13
Lsm6P62313 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC15.87■□□□□ 0.13
Lsm6P62313 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Lsm6P62313 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Lsm6P62313 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Lsm6P62313 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Lsm6P62313 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Lsm6P62313 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Lsm6P62313 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Lsm6P62313 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Lsm6P62313 Fam105a-203ENSMUST00000226170 3043 ntBASIC15.86■□□□□ 0.13
Lsm6P62313 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Lsm6P62313 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
Lsm6P62313 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Lsm6P62313 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Lsm6P62313 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Lsm6P62313 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Lsm6P62313 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Lsm6P62313 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Lsm6P62313 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Lsm6P62313 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Lsm6P62313 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Lsm6P62313 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Lsm6P62313 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Lsm6P62313 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Lsm6P62313 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC15.85■□□□□ 0.13
Lsm6P62313 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Lsm6P62313 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Lsm6P62313 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC15.85■□□□□ 0.13
Lsm6P62313 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Lsm6P62313 Gm7291-201ENSMUST00000199147 382 ntBASIC15.85■□□□□ 0.13
Lsm6P62313 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Lsm6P62313 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Lsm6P62313 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Lsm6P62313 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Lsm6P62313 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Lsm6P62313 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Lsm6P62313 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Lsm6P62313 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Lsm6P62313 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Lsm6P62313 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Lsm6P62313 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Lsm6P62313 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC15.84■□□□□ 0.13
Lsm6P62313 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Lsm6P62313 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Lsm6P62313 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Lsm6P62313 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Lsm6P62313 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Lsm6P62313 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Lsm6P62313 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Lsm6P62313 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC15.83■□□□□ 0.13
Lsm6P62313 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Lsm6P62313 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Lsm6P62313 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
Lsm6P62313 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC15.83■□□□□ 0.12
Lsm6P62313 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Lsm6P62313 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC15.83■□□□□ 0.12
Lsm6P62313 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Lsm6P62313 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC15.83■□□□□ 0.12
Lsm6P62313 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Lsm6P62313 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC15.83■□□□□ 0.12
Lsm6P62313 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC15.83■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms