Protein–RNA interactions for Protein: P58854

Tubgcp3, Gamma-tubulin complex component 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubgcp3P58854 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Tubgcp3P58854 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Tubgcp3P58854 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Tubgcp3P58854 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Tubgcp3P58854 AC121961.1-201ENSMUST00000218594 1779 ntBASIC18.51■□□□□ 0.55
Tubgcp3P58854 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Tubgcp3P58854 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Tubgcp3P58854 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Tubgcp3P58854 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Tubgcp3P58854 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC18.51■□□□□ 0.55
Tubgcp3P58854 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Tubgcp3P58854 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Tubgcp3P58854 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Tubgcp3P58854 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
Tubgcp3P58854 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
Tubgcp3P58854 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Tubgcp3P58854 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Tubgcp3P58854 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Tubgcp3P58854 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Tubgcp3P58854 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Tubgcp3P58854 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Tubgcp3P58854 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC18.5■□□□□ 0.55
Tubgcp3P58854 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Tubgcp3P58854 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Tubgcp3P58854 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Tubgcp3P58854 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Tubgcp3P58854 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Tubgcp3P58854 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Tubgcp3P58854 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Tubgcp3P58854 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Tubgcp3P58854 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Tubgcp3P58854 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Tubgcp3P58854 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Tubgcp3P58854 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Tubgcp3P58854 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Tubgcp3P58854 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Tubgcp3P58854 Fst-202ENSMUST00000223640 2612 ntBASIC18.49■□□□□ 0.55
Tubgcp3P58854 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Tubgcp3P58854 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Tubgcp3P58854 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Tubgcp3P58854 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Tubgcp3P58854 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Tubgcp3P58854 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Tubgcp3P58854 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Tubgcp3P58854 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Tubgcp3P58854 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Tubgcp3P58854 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Tubgcp3P58854 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Tubgcp3P58854 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Tubgcp3P58854 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC18.48■□□□□ 0.55
Tubgcp3P58854 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Tubgcp3P58854 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Tubgcp3P58854 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Tubgcp3P58854 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Tubgcp3P58854 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC18.48■□□□□ 0.55
Tubgcp3P58854 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Tubgcp3P58854 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Tubgcp3P58854 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC18.48■□□□□ 0.55
Tubgcp3P58854 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Tubgcp3P58854 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Tubgcp3P58854 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Tubgcp3P58854 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC18.48■□□□□ 0.55
Tubgcp3P58854 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Tubgcp3P58854 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Tubgcp3P58854 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC18.48■□□□□ 0.55
Tubgcp3P58854 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC18.48■□□□□ 0.55
Tubgcp3P58854 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC18.47■□□□□ 0.55
Tubgcp3P58854 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Tubgcp3P58854 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Tubgcp3P58854 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC18.47■□□□□ 0.55
Tubgcp3P58854 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC18.47■□□□□ 0.55
Tubgcp3P58854 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC18.47■□□□□ 0.55
Tubgcp3P58854 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC18.47■□□□□ 0.55
Tubgcp3P58854 Gm6365-201ENSMUST00000054711 744 ntBASIC18.47■□□□□ 0.55
Tubgcp3P58854 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Tubgcp3P58854 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Tubgcp3P58854 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Tubgcp3P58854 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Tubgcp3P58854 Shroom3-211ENSMUST00000225438 5742 ntBASIC18.47■□□□□ 0.55
Tubgcp3P58854 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Tubgcp3P58854 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Tubgcp3P58854 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Tubgcp3P58854 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Tubgcp3P58854 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Tubgcp3P58854 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Tubgcp3P58854 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Tubgcp3P58854 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC18.46■□□□□ 0.55
Tubgcp3P58854 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Tubgcp3P58854 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Tubgcp3P58854 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Tubgcp3P58854 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Tubgcp3P58854 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Tubgcp3P58854 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC18.46■□□□□ 0.55
Tubgcp3P58854 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Tubgcp3P58854 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Tubgcp3P58854 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.54
Tubgcp3P58854 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
Tubgcp3P58854 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC18.45■□□□□ 0.54
Tubgcp3P58854 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Tubgcp3P58854 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms