Protein–RNA interactions for Protein: P58242

Smpdl3b, Acid sphingomyelinase-like phosphodiesterase 3b, mousemouse

Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smpdl3bP58242 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
Smpdl3bP58242 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
Smpdl3bP58242 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC18.37■□□□□ 0.53
Smpdl3bP58242 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Smpdl3bP58242 Gm27275-201ENSMUST00000184318 272 ntBASIC18.37■□□□□ 0.53
Smpdl3bP58242 Wnt10b-205ENSMUST00000226846 1204 ntBASIC18.37■□□□□ 0.53
Smpdl3bP58242 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Smpdl3bP58242 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Smpdl3bP58242 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC18.37■□□□□ 0.53
Smpdl3bP58242 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Smpdl3bP58242 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Smpdl3bP58242 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Smpdl3bP58242 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Smpdl3bP58242 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Smpdl3bP58242 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC18.36■□□□□ 0.53
Smpdl3bP58242 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Smpdl3bP58242 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Smpdl3bP58242 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC18.36■□□□□ 0.53
Smpdl3bP58242 Gm10653-202ENSMUST00000139570 835 ntBASIC18.36■□□□□ 0.53
Smpdl3bP58242 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC18.36■□□□□ 0.53
Smpdl3bP58242 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Smpdl3bP58242 AC121961.1-201ENSMUST00000218594 1779 ntBASIC18.36■□□□□ 0.53
Smpdl3bP58242 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC18.36■□□□□ 0.53
Smpdl3bP58242 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Smpdl3bP58242 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Smpdl3bP58242 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Smpdl3bP58242 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Smpdl3bP58242 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Smpdl3bP58242 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Smpdl3bP58242 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Smpdl3bP58242 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Smpdl3bP58242 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Smpdl3bP58242 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Smpdl3bP58242 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Smpdl3bP58242 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC18.35■□□□□ 0.53
Smpdl3bP58242 Gm15847-201ENSMUST00000121417 1065 ntBASIC18.35■□□□□ 0.53
Smpdl3bP58242 Gm27011-201ENSMUST00000182352 972 ntBASIC18.35■□□□□ 0.53
Smpdl3bP58242 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Smpdl3bP58242 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Smpdl3bP58242 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Smpdl3bP58242 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Smpdl3bP58242 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Smpdl3bP58242 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Smpdl3bP58242 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Smpdl3bP58242 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Smpdl3bP58242 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Smpdl3bP58242 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Smpdl3bP58242 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Smpdl3bP58242 Dio3-201ENSMUST00000097228 1449 ntBASIC18.34■□□□□ 0.53
Smpdl3bP58242 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Smpdl3bP58242 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Smpdl3bP58242 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Smpdl3bP58242 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Smpdl3bP58242 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC18.34■□□□□ 0.53
Smpdl3bP58242 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Smpdl3bP58242 Spcs1-207ENSMUST00000228767 1008 ntBASIC18.34■□□□□ 0.53
Smpdl3bP58242 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Smpdl3bP58242 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC18.34■□□□□ 0.53
Smpdl3bP58242 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Smpdl3bP58242 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Smpdl3bP58242 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Smpdl3bP58242 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Smpdl3bP58242 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Smpdl3bP58242 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Smpdl3bP58242 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
Smpdl3bP58242 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC18.33■□□□□ 0.53
Smpdl3bP58242 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Smpdl3bP58242 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Smpdl3bP58242 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Smpdl3bP58242 Gm37856-201ENSMUST00000191634 999 ntBASIC18.33■□□□□ 0.52
Smpdl3bP58242 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Smpdl3bP58242 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Smpdl3bP58242 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Smpdl3bP58242 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Smpdl3bP58242 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Smpdl3bP58242 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Smpdl3bP58242 Flg-201ENSMUST00000050758 1488 ntBASIC18.33■□□□□ 0.52
Smpdl3bP58242 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Smpdl3bP58242 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
Smpdl3bP58242 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Smpdl3bP58242 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Smpdl3bP58242 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Smpdl3bP58242 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Smpdl3bP58242 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Smpdl3bP58242 Trmt13-210ENSMUST00000198454 880 ntBASIC18.32■□□□□ 0.52
Smpdl3bP58242 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Smpdl3bP58242 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Smpdl3bP58242 Gm5112-201ENSMUST00000204407 2368 ntBASIC18.32■□□□□ 0.52
Smpdl3bP58242 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Smpdl3bP58242 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Smpdl3bP58242 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Smpdl3bP58242 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Smpdl3bP58242 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Smpdl3bP58242 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC18.31■□□□□ 0.52
Smpdl3bP58242 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Smpdl3bP58242 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Smpdl3bP58242 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC18.31■□□□□ 0.52
Smpdl3bP58242 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC18.31■□□□□ 0.52
Smpdl3bP58242 AC135637.1-201ENSMUST00000227750 365 ntBASIC18.31■□□□□ 0.52
Smpdl3bP58242 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms