Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC19.22■□□□□ 0.67
NcanP55066 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NcanP55066 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
NcanP55066 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NcanP55066 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
NcanP55066 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NcanP55066 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NcanP55066 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NcanP55066 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
NcanP55066 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
NcanP55066 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NcanP55066 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NcanP55066 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
NcanP55066 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NcanP55066 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NcanP55066 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NcanP55066 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
NcanP55066 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
NcanP55066 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NcanP55066 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
NcanP55066 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NcanP55066 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
NcanP55066 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NcanP55066 AC164629.2-201ENSMUST00000217916 270 ntBASIC19.2■□□□□ 0.66
NcanP55066 Gm7370-201ENSMUST00000219471 767 ntBASIC19.2■□□□□ 0.66
NcanP55066 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NcanP55066 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NcanP55066 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
NcanP55066 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NcanP55066 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
NcanP55066 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC19.19■□□□□ 0.66
NcanP55066 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
NcanP55066 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NcanP55066 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
NcanP55066 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
NcanP55066 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
NcanP55066 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
NcanP55066 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NcanP55066 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NcanP55066 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
NcanP55066 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
NcanP55066 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
NcanP55066 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
NcanP55066 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
NcanP55066 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
NcanP55066 Gm24589-201ENSMUST00000116692 94 ntBASIC19.18■□□□□ 0.66
NcanP55066 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NcanP55066 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
NcanP55066 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
NcanP55066 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NcanP55066 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
NcanP55066 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NcanP55066 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NcanP55066 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
NcanP55066 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
NcanP55066 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
NcanP55066 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
NcanP55066 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
NcanP55066 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NcanP55066 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
NcanP55066 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
NcanP55066 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
NcanP55066 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NcanP55066 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
NcanP55066 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NcanP55066 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC19.16■□□□□ 0.66
NcanP55066 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC19.16■□□□□ 0.66
NcanP55066 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
NcanP55066 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC19.16■□□□□ 0.66
NcanP55066 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC19.16■□□□□ 0.66
NcanP55066 Gm9013-201ENSMUST00000132939 882 ntBASIC19.16■□□□□ 0.66
NcanP55066 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC19.16■□□□□ 0.66
NcanP55066 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
NcanP55066 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC19.16■□□□□ 0.66
NcanP55066 Gm7791-201ENSMUST00000219066 539 ntBASIC19.16■□□□□ 0.66
NcanP55066 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NcanP55066 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NcanP55066 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
NcanP55066 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
NcanP55066 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NcanP55066 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
NcanP55066 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
NcanP55066 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NcanP55066 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NcanP55066 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
NcanP55066 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
NcanP55066 Gm27389-201ENSMUST00000183622 195 ntBASIC19.15■□□□□ 0.66
NcanP55066 Gm37805-201ENSMUST00000192612 1094 ntBASIC19.15■□□□□ 0.66
NcanP55066 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC19.15■□□□□ 0.66
NcanP55066 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NcanP55066 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
NcanP55066 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
NcanP55066 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.66
NcanP55066 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.66
NcanP55066 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
NcanP55066 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
NcanP55066 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC19.14■□□□□ 0.65
NcanP55066 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
NcanP55066 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC19.14■□□□□ 0.65
NcanP55066 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 77.7 ms