Protein–RNA interactions for Protein: P48540

Gdnf, Glial cell line-derived neurotrophic factor, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GdnfP48540 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
GdnfP48540 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
GdnfP48540 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
GdnfP48540 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
GdnfP48540 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
GdnfP48540 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
GdnfP48540 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
GdnfP48540 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
GdnfP48540 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
GdnfP48540 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
GdnfP48540 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC15.86■□□□□ 0.13
GdnfP48540 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
GdnfP48540 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
GdnfP48540 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
GdnfP48540 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
GdnfP48540 Gm6598-201ENSMUST00000202719 2615 ntBASIC15.85■□□□□ 0.13
GdnfP48540 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
GdnfP48540 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
GdnfP48540 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
GdnfP48540 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
GdnfP48540 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
GdnfP48540 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
GdnfP48540 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
GdnfP48540 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
GdnfP48540 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
GdnfP48540 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
GdnfP48540 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
GdnfP48540 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
GdnfP48540 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
GdnfP48540 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
GdnfP48540 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
GdnfP48540 Fcho2-208ENSMUST00000224992 2964 ntBASIC15.84■□□□□ 0.13
GdnfP48540 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC15.84■□□□□ 0.13
GdnfP48540 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
GdnfP48540 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
GdnfP48540 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
GdnfP48540 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC15.84■□□□□ 0.13
GdnfP48540 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
GdnfP48540 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
GdnfP48540 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
GdnfP48540 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
GdnfP48540 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
GdnfP48540 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
GdnfP48540 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
GdnfP48540 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC15.84■□□□□ 0.13
GdnfP48540 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
GdnfP48540 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC15.84■□□□□ 0.13
GdnfP48540 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC15.84■□□□□ 0.13
GdnfP48540 Gm15635-204ENSMUST00000208024 2539 ntBASIC15.84■□□□□ 0.13
GdnfP48540 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.13
GdnfP48540 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
GdnfP48540 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
GdnfP48540 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
GdnfP48540 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.13
GdnfP48540 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
GdnfP48540 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
GdnfP48540 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
GdnfP48540 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
GdnfP48540 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
GdnfP48540 Gm14281-201ENSMUST00000121700 1294 ntBASIC15.83■□□□□ 0.12
GdnfP48540 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC15.83■□□□□ 0.12
GdnfP48540 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC15.83■□□□□ 0.12
GdnfP48540 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC15.83■□□□□ 0.12
GdnfP48540 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
GdnfP48540 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC15.83■□□□□ 0.12
GdnfP48540 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
GdnfP48540 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC15.83■□□□□ 0.12
GdnfP48540 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
GdnfP48540 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
GdnfP48540 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
GdnfP48540 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
GdnfP48540 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
GdnfP48540 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
GdnfP48540 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC15.82■□□□□ 0.12
GdnfP48540 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
GdnfP48540 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
GdnfP48540 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC15.82■□□□□ 0.12
GdnfP48540 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
GdnfP48540 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
GdnfP48540 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
GdnfP48540 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
GdnfP48540 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
GdnfP48540 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
GdnfP48540 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
GdnfP48540 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
GdnfP48540 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
GdnfP48540 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
GdnfP48540 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC15.82■□□□□ 0.12
GdnfP48540 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC15.82■□□□□ 0.12
GdnfP48540 Zcchc6-207ENSMUST00000225576 2499 ntBASIC15.82■□□□□ 0.12
GdnfP48540 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
GdnfP48540 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
GdnfP48540 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC15.81■□□□□ 0.12
GdnfP48540 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
GdnfP48540 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
GdnfP48540 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC15.81■□□□□ 0.12
GdnfP48540 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC15.81■□□□□ 0.12
GdnfP48540 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC15.81■□□□□ 0.12
GdnfP48540 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
GdnfP48540 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms