Protein–RNA interactions for Protein: P39876

Timp3, Metalloproteinase inhibitor 3, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Timp3P39876 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Timp3P39876 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Timp3P39876 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Timp3P39876 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Timp3P39876 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC14.81□□□□□ -0.04
Timp3P39876 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Timp3P39876 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Timp3P39876 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC14.81□□□□□ -0.04
Timp3P39876 Gm42939-201ENSMUST00000197514 2205 ntBASIC14.81□□□□□ -0.04
Timp3P39876 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Timp3P39876 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC14.81□□□□□ -0.04
Timp3P39876 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Timp3P39876 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Timp3P39876 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Timp3P39876 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Timp3P39876 Gm45640-201ENSMUST00000210665 1896 ntBASIC14.8□□□□□ -0.04
Timp3P39876 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Timp3P39876 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Timp3P39876 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Timp3P39876 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Timp3P39876 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Timp3P39876 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Timp3P39876 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Timp3P39876 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Timp3P39876 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC14.8□□□□□ -0.04
Timp3P39876 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC14.8□□□□□ -0.04
Timp3P39876 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Timp3P39876 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Timp3P39876 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Timp3P39876 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Timp3P39876 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Timp3P39876 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Timp3P39876 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Timp3P39876 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Timp3P39876 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Timp3P39876 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC14.79□□□□□ -0.04
Timp3P39876 Gm44549-201ENSMUST00000208351 577 ntBASIC14.79□□□□□ -0.04
Timp3P39876 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Timp3P39876 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Timp3P39876 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Timp3P39876 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Timp3P39876 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Timp3P39876 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Timp3P39876 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Timp3P39876 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC14.79□□□□□ -0.04
Timp3P39876 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Timp3P39876 Rncr4-201ENSMUST00000194541 2234 ntBASIC14.78□□□□□ -0.04
Timp3P39876 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
Timp3P39876 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Timp3P39876 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Timp3P39876 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Timp3P39876 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Timp3P39876 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Timp3P39876 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Timp3P39876 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Timp3P39876 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Timp3P39876 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Timp3P39876 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC14.78□□□□□ -0.04
Timp3P39876 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC14.78□□□□□ -0.04
Timp3P39876 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Timp3P39876 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Timp3P39876 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC14.78□□□□□ -0.04
Timp3P39876 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Timp3P39876 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Timp3P39876 Gm10812-201ENSMUST00000099864 546 ntBASIC14.78□□□□□ -0.04
Timp3P39876 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Timp3P39876 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Timp3P39876 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Timp3P39876 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Timp3P39876 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC14.78□□□□□ -0.04
Timp3P39876 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Timp3P39876 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Timp3P39876 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Timp3P39876 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Timp3P39876 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC14.77□□□□□ -0.04
Timp3P39876 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Timp3P39876 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC14.77□□□□□ -0.04
Timp3P39876 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Timp3P39876 Gm12896-201ENSMUST00000118430 226 ntBASIC14.77□□□□□ -0.05
Timp3P39876 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Timp3P39876 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC14.77□□□□□ -0.05
Timp3P39876 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Timp3P39876 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Timp3P39876 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Timp3P39876 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Timp3P39876 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Timp3P39876 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Timp3P39876 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Timp3P39876 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Timp3P39876 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Timp3P39876 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Timp3P39876 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Timp3P39876 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Timp3P39876 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Timp3P39876 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Timp3P39876 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Timp3P39876 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Timp3P39876 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Timp3P39876 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Timp3P39876 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms