Protein–RNA interactions for Protein: P39749

Fen1, Flap endonuclease 1, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fen1P39749 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Fen1P39749 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC18.22■□□□□ 0.51
Fen1P39749 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Fen1P39749 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Fen1P39749 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC18.22■□□□□ 0.51
Fen1P39749 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Fen1P39749 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Fen1P39749 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Fen1P39749 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Fen1P39749 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Fen1P39749 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC18.21■□□□□ 0.51
Fen1P39749 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Fen1P39749 Gm43702-201ENSMUST00000198772 2546 ntBASIC18.21■□□□□ 0.51
Fen1P39749 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Fen1P39749 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Fen1P39749 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Fen1P39749 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Fen1P39749 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Fen1P39749 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC18.21■□□□□ 0.51
Fen1P39749 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC18.21■□□□□ 0.51
Fen1P39749 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Fen1P39749 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Fen1P39749 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Fen1P39749 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Fen1P39749 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC18.21■□□□□ 0.51
Fen1P39749 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Fen1P39749 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Fen1P39749 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Fen1P39749 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Fen1P39749 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Fen1P39749 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Fen1P39749 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Fen1P39749 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Fen1P39749 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Fen1P39749 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Fen1P39749 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Fen1P39749 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Fen1P39749 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Fen1P39749 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
Fen1P39749 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Fen1P39749 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Fen1P39749 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Fen1P39749 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Fen1P39749 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Fen1P39749 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Fen1P39749 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Fen1P39749 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Fen1P39749 CT030146.1-201ENSMUST00000220919 217 ntBASIC18.19■□□□□ 0.5
Fen1P39749 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Fen1P39749 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC18.19■□□□□ 0.5
Fen1P39749 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Fen1P39749 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Fen1P39749 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC18.19■□□□□ 0.5
Fen1P39749 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Fen1P39749 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Fen1P39749 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Fen1P39749 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Fen1P39749 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Fen1P39749 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Fen1P39749 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Fen1P39749 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC18.18■□□□□ 0.5
Fen1P39749 Gm45906-201ENSMUST00000208911 1430 ntBASIC18.18■□□□□ 0.5
Fen1P39749 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Fen1P39749 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC18.18■□□□□ 0.5
Fen1P39749 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC18.18■□□□□ 0.5
Fen1P39749 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Fen1P39749 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Fen1P39749 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Fen1P39749 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Fen1P39749 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Fen1P39749 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Fen1P39749 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Fen1P39749 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Fen1P39749 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Fen1P39749 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Fen1P39749 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Fen1P39749 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
Fen1P39749 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Fen1P39749 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC18.17■□□□□ 0.5
Fen1P39749 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Fen1P39749 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Fen1P39749 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Fen1P39749 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Fen1P39749 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
Fen1P39749 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
Fen1P39749 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC18.17■□□□□ 0.5
Fen1P39749 Smad6-203ENSMUST00000179458 273 ntBASIC18.17■□□□□ 0.5
Fen1P39749 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC18.17■□□□□ 0.5
Fen1P39749 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Fen1P39749 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Fen1P39749 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Fen1P39749 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Fen1P39749 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Fen1P39749 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Fen1P39749 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Fen1P39749 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Fen1P39749 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
Fen1P39749 Gm27801-201ENSMUST00000184174 223 ntBASIC18.16■□□□□ 0.5
Fen1P39749 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Fen1P39749 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms