Protein–RNA interactions for Protein: P35441

Thbs1, Thrombospondin-1, mousemouse

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thbs1P35441 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Thbs1P35441 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Thbs1P35441 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Thbs1P35441 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC16.74■□□□□ 0.27
Thbs1P35441 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Thbs1P35441 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Thbs1P35441 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Thbs1P35441 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Thbs1P35441 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Thbs1P35441 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Thbs1P35441 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Thbs1P35441 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Thbs1P35441 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC16.74■□□□□ 0.27
Thbs1P35441 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Thbs1P35441 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Thbs1P35441 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Thbs1P35441 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC16.73■□□□□ 0.27
Thbs1P35441 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Thbs1P35441 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Thbs1P35441 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Thbs1P35441 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC16.73■□□□□ 0.27
Thbs1P35441 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Thbs1P35441 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Thbs1P35441 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Thbs1P35441 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC16.73■□□□□ 0.27
Thbs1P35441 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Thbs1P35441 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Thbs1P35441 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Thbs1P35441 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Thbs1P35441 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Thbs1P35441 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Thbs1P35441 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC16.73■□□□□ 0.27
Thbs1P35441 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Thbs1P35441 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC16.73■□□□□ 0.27
Thbs1P35441 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Thbs1P35441 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Thbs1P35441 Rarb-207ENSMUST00000225921 2756 ntBASIC16.72■□□□□ 0.27
Thbs1P35441 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Thbs1P35441 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Thbs1P35441 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC16.72■□□□□ 0.27
Thbs1P35441 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Thbs1P35441 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC16.72■□□□□ 0.27
Thbs1P35441 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Thbs1P35441 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC16.72■□□□□ 0.27
Thbs1P35441 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC16.72■□□□□ 0.27
Thbs1P35441 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC16.72■□□□□ 0.27
Thbs1P35441 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Thbs1P35441 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Thbs1P35441 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Thbs1P35441 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Thbs1P35441 Gm44832-201ENSMUST00000208849 2303 ntBASIC16.71■□□□□ 0.27
Thbs1P35441 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Thbs1P35441 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Thbs1P35441 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC16.71■□□□□ 0.27
Thbs1P35441 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Thbs1P35441 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Thbs1P35441 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Thbs1P35441 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Thbs1P35441 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Thbs1P35441 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Thbs1P35441 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Thbs1P35441 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC16.71■□□□□ 0.27
Thbs1P35441 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC16.71■□□□□ 0.27
Thbs1P35441 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC16.71■□□□□ 0.27
Thbs1P35441 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Thbs1P35441 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Thbs1P35441 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Thbs1P35441 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Thbs1P35441 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Thbs1P35441 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Thbs1P35441 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
Thbs1P35441 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Thbs1P35441 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Thbs1P35441 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Thbs1P35441 Gm7290-201ENSMUST00000104990 617 ntBASIC16.7■□□□□ 0.26
Thbs1P35441 Gm12918-201ENSMUST00000120234 636 ntBASIC16.7■□□□□ 0.26
Thbs1P35441 Gm15710-201ENSMUST00000121821 636 ntBASIC16.7■□□□□ 0.26
Thbs1P35441 Gm5075-201ENSMUST00000196916 622 ntBASIC16.7■□□□□ 0.26
Thbs1P35441 CT025689.6-201ENSMUST00000224991 1104 ntBASIC16.7■□□□□ 0.26
Thbs1P35441 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC16.7■□□□□ 0.26
Thbs1P35441 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC16.7■□□□□ 0.26
Thbs1P35441 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Thbs1P35441 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Thbs1P35441 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Thbs1P35441 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Thbs1P35441 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Thbs1P35441 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Thbs1P35441 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Thbs1P35441 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Thbs1P35441 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC16.69■□□□□ 0.26
Thbs1P35441 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
Thbs1P35441 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Thbs1P35441 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC16.69■□□□□ 0.26
Thbs1P35441 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Thbs1P35441 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC16.69■□□□□ 0.26
Thbs1P35441 Gm6365-201ENSMUST00000054711 744 ntBASIC16.69■□□□□ 0.26
Thbs1P35441 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Thbs1P35441 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Thbs1P35441 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Thbs1P35441 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms