Protein–RNA interactions for Protein: P28704

Rxrb, Retinoic acid receptor RXR-beta, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RxrbP28704 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
RxrbP28704 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
RxrbP28704 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
RxrbP28704 Gm27032-201ENSMUST00000183124 1116 ntBASIC18.22■□□□□ 0.51
RxrbP28704 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
RxrbP28704 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
RxrbP28704 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
RxrbP28704 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC18.22■□□□□ 0.51
RxrbP28704 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
RxrbP28704 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
RxrbP28704 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
RxrbP28704 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC18.22■□□□□ 0.51
RxrbP28704 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RxrbP28704 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
RxrbP28704 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RxrbP28704 Gm28265-201ENSMUST00000188201 2319 ntBASIC18.21■□□□□ 0.51
RxrbP28704 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RxrbP28704 Gm37519-201ENSMUST00000191687 2210 ntBASIC18.21■□□□□ 0.51
RxrbP28704 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RxrbP28704 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RxrbP28704 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
RxrbP28704 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RxrbP28704 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC18.21■□□□□ 0.51
RxrbP28704 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC18.21■□□□□ 0.51
RxrbP28704 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC18.21■□□□□ 0.51
RxrbP28704 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RxrbP28704 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RxrbP28704 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
RxrbP28704 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
RxrbP28704 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
RxrbP28704 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RxrbP28704 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RxrbP28704 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
RxrbP28704 Gm37374-201ENSMUST00000194954 1829 ntBASIC18.21■□□□□ 0.51
RxrbP28704 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
RxrbP28704 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RxrbP28704 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC18.2■□□□□ 0.5
RxrbP28704 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
RxrbP28704 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
RxrbP28704 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RxrbP28704 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC18.2■□□□□ 0.5
RxrbP28704 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
RxrbP28704 Gm6139-201ENSMUST00000079261 882 ntBASIC18.2■□□□□ 0.5
RxrbP28704 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
RxrbP28704 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
RxrbP28704 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC18.2■□□□□ 0.5
RxrbP28704 Gm42918-201ENSMUST00000199249 1580 ntBASIC18.2■□□□□ 0.5
RxrbP28704 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
RxrbP28704 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC18.2■□□□□ 0.5
RxrbP28704 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RxrbP28704 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
RxrbP28704 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RxrbP28704 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
RxrbP28704 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RxrbP28704 Gm8309-201ENSMUST00000206627 1448 ntBASIC18.19■□□□□ 0.5
RxrbP28704 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RxrbP28704 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RxrbP28704 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RxrbP28704 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RxrbP28704 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RxrbP28704 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC18.19■□□□□ 0.5
RxrbP28704 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RxrbP28704 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RxrbP28704 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RxrbP28704 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
RxrbP28704 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
RxrbP28704 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC18.18■□□□□ 0.5
RxrbP28704 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RxrbP28704 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RxrbP28704 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
RxrbP28704 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC18.18■□□□□ 0.5
RxrbP28704 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC18.18■□□□□ 0.5
RxrbP28704 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC18.18■□□□□ 0.5
RxrbP28704 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RxrbP28704 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
RxrbP28704 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC18.18■□□□□ 0.5
RxrbP28704 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RxrbP28704 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RxrbP28704 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RxrbP28704 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RxrbP28704 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RxrbP28704 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
RxrbP28704 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
RxrbP28704 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC18.17■□□□□ 0.5
RxrbP28704 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RxrbP28704 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RxrbP28704 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
RxrbP28704 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RxrbP28704 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RxrbP28704 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
RxrbP28704 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RxrbP28704 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RxrbP28704 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RxrbP28704 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RxrbP28704 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RxrbP28704 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RxrbP28704 Gm26833-201ENSMUST00000180899 440 ntBASIC18.16■□□□□ 0.5
RxrbP28704 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
RxrbP28704 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC18.16■□□□□ 0.5
RxrbP28704 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms