Protein–RNA interactions for Protein: P24549

Aldh1a1, Retinal dehydrogenase 1, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Aldh1a1P24549 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Aldh1a1P24549 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Aldh1a1P24549 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Aldh1a1P24549 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Aldh1a1P24549 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Aldh1a1P24549 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC19.48■□□□□ 0.71
Aldh1a1P24549 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC19.47■□□□□ 0.71
Aldh1a1P24549 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Aldh1a1P24549 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
Aldh1a1P24549 Gm12085-201ENSMUST00000119263 940 ntBASIC19.47■□□□□ 0.71
Aldh1a1P24549 Gm9103-201ENSMUST00000119371 405 ntBASIC19.47■□□□□ 0.71
Aldh1a1P24549 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC19.47■□□□□ 0.71
Aldh1a1P24549 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC19.47■□□□□ 0.71
Aldh1a1P24549 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Aldh1a1P24549 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Aldh1a1P24549 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC19.47■□□□□ 0.71
Aldh1a1P24549 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC19.47■□□□□ 0.71
Aldh1a1P24549 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Aldh1a1P24549 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Aldh1a1P24549 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Aldh1a1P24549 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Aldh1a1P24549 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Aldh1a1P24549 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Aldh1a1P24549 Gm44544-201ENSMUST00000207052 1844 ntBASIC19.46■□□□□ 0.71
Aldh1a1P24549 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Aldh1a1P24549 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Aldh1a1P24549 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Aldh1a1P24549 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Aldh1a1P24549 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Aldh1a1P24549 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Aldh1a1P24549 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Aldh1a1P24549 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Aldh1a1P24549 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Aldh1a1P24549 Gm43353-201ENSMUST00000199224 1295 ntBASIC19.46■□□□□ 0.71
Aldh1a1P24549 AC159205.3-201ENSMUST00000224614 874 ntBASIC19.46■□□□□ 0.71
Aldh1a1P24549 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Aldh1a1P24549 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Aldh1a1P24549 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Aldh1a1P24549 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Aldh1a1P24549 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Aldh1a1P24549 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC19.45■□□□□ 0.7
Aldh1a1P24549 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Aldh1a1P24549 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Aldh1a1P24549 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Aldh1a1P24549 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Aldh1a1P24549 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC19.45■□□□□ 0.7
Aldh1a1P24549 Gm22697-201ENSMUST00000175194 63 ntBASIC19.45■□□□□ 0.7
Aldh1a1P24549 Gm38027-201ENSMUST00000192315 235 ntBASIC19.45■□□□□ 0.7
Aldh1a1P24549 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC19.45■□□□□ 0.7
Aldh1a1P24549 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Aldh1a1P24549 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Aldh1a1P24549 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Aldh1a1P24549 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Aldh1a1P24549 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Aldh1a1P24549 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Aldh1a1P24549 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Aldh1a1P24549 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Aldh1a1P24549 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Aldh1a1P24549 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC19.44■□□□□ 0.7
Aldh1a1P24549 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Aldh1a1P24549 Gm37805-201ENSMUST00000192612 1094 ntBASIC19.44■□□□□ 0.7
Aldh1a1P24549 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC19.44■□□□□ 0.7
Aldh1a1P24549 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC19.44■□□□□ 0.7
Aldh1a1P24549 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Aldh1a1P24549 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Aldh1a1P24549 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Aldh1a1P24549 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Aldh1a1P24549 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Aldh1a1P24549 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Aldh1a1P24549 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Aldh1a1P24549 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Aldh1a1P24549 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Aldh1a1P24549 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Aldh1a1P24549 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Aldh1a1P24549 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Aldh1a1P24549 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Aldh1a1P24549 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Aldh1a1P24549 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Aldh1a1P24549 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Aldh1a1P24549 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC19.43■□□□□ 0.7
Aldh1a1P24549 Mir2861-201ENSMUST00000175539 82 ntBASIC19.43■□□□□ 0.7
Aldh1a1P24549 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Aldh1a1P24549 AC124603.1-201ENSMUST00000223843 308 ntBASIC19.43■□□□□ 0.7
Aldh1a1P24549 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Aldh1a1P24549 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Aldh1a1P24549 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Aldh1a1P24549 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Aldh1a1P24549 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Aldh1a1P24549 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Aldh1a1P24549 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Aldh1a1P24549 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Aldh1a1P24549 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Aldh1a1P24549 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Aldh1a1P24549 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Aldh1a1P24549 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Aldh1a1P24549 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Aldh1a1P24549 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Aldh1a1P24549 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Aldh1a1P24549 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Aldh1a1P24549 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms