Protein–RNA interactions for Protein: P23611

Irf8, Interferon regulatory factor 8, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Irf8P23611 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Irf8P23611 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Irf8P23611 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
Irf8P23611 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Irf8P23611 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Irf8P23611 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Irf8P23611 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Irf8P23611 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Irf8P23611 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Irf8P23611 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Irf8P23611 CT025689.6-201ENSMUST00000224991 1104 ntBASIC19.57■□□□□ 0.72
Irf8P23611 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Irf8P23611 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Irf8P23611 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Irf8P23611 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Irf8P23611 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Irf8P23611 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Irf8P23611 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Irf8P23611 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Irf8P23611 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Irf8P23611 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC19.56■□□□□ 0.72
Irf8P23611 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Irf8P23611 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Irf8P23611 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Irf8P23611 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Irf8P23611 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Irf8P23611 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Irf8P23611 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Irf8P23611 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC19.55■□□□□ 0.72
Irf8P23611 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Irf8P23611 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Irf8P23611 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Irf8P23611 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Irf8P23611 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Irf8P23611 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Irf8P23611 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Irf8P23611 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Irf8P23611 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Irf8P23611 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Irf8P23611 Gm21596-201ENSMUST00000178049 1316 ntBASIC19.54■□□□□ 0.72
Irf8P23611 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Irf8P23611 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Irf8P23611 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
Irf8P23611 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Irf8P23611 Gm12527-201ENSMUST00000117967 564 ntBASIC19.54■□□□□ 0.72
Irf8P23611 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Irf8P23611 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Irf8P23611 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Irf8P23611 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC19.54■□□□□ 0.72
Irf8P23611 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Irf8P23611 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Irf8P23611 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Irf8P23611 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC19.53■□□□□ 0.72
Irf8P23611 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Irf8P23611 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC19.53■□□□□ 0.72
Irf8P23611 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC19.53■□□□□ 0.72
Irf8P23611 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC19.53■□□□□ 0.72
Irf8P23611 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Irf8P23611 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Irf8P23611 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Irf8P23611 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Irf8P23611 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Irf8P23611 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Irf8P23611 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Irf8P23611 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Irf8P23611 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Irf8P23611 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Irf8P23611 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Irf8P23611 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Irf8P23611 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Irf8P23611 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Irf8P23611 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Irf8P23611 Gm11249-201ENSMUST00000117071 859 ntBASIC19.52■□□□□ 0.72
Irf8P23611 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Irf8P23611 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Irf8P23611 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC19.52■□□□□ 0.72
Irf8P23611 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Irf8P23611 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC19.52■□□□□ 0.71
Irf8P23611 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Irf8P23611 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Irf8P23611 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Irf8P23611 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Irf8P23611 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Irf8P23611 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Irf8P23611 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Irf8P23611 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Irf8P23611 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC19.51■□□□□ 0.71
Irf8P23611 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Irf8P23611 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Irf8P23611 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Irf8P23611 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Irf8P23611 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Irf8P23611 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Irf8P23611 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Irf8P23611 Fst-202ENSMUST00000223640 2612 ntBASIC19.51■□□□□ 0.71
Irf8P23611 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Irf8P23611 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Irf8P23611 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
Irf8P23611 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Irf8P23611 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 15.1 ms