Protein–RNA interactions for Protein: P20334

Tnfrsf9, Tumor necrosis factor receptor superfamily member 9, mousemouse

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf9P20334 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Tnfrsf9P20334 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Tnfrsf9P20334 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC14.7□□□□□ -0.06
Tnfrsf9P20334 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Tnfrsf9P20334 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Tnfrsf9P20334 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Tnfrsf9P20334 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Tnfrsf9P20334 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Tnfrsf9P20334 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Tnfrsf9P20334 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Tnfrsf9P20334 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Tnfrsf9P20334 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Tnfrsf9P20334 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Tnfrsf9P20334 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
Tnfrsf9P20334 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Tnfrsf9P20334 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC14.69□□□□□ -0.06
Tnfrsf9P20334 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Tnfrsf9P20334 Gm2559-201ENSMUST00000201323 363 ntBASIC14.69□□□□□ -0.06
Tnfrsf9P20334 AC154266.1-201ENSMUST00000223190 503 ntBASIC14.69□□□□□ -0.06
Tnfrsf9P20334 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Tnfrsf9P20334 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Tnfrsf9P20334 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Tnfrsf9P20334 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Tnfrsf9P20334 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Tnfrsf9P20334 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Tnfrsf9P20334 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Tnfrsf9P20334 AA386476-201ENSMUST00000098781 1665 ntBASIC14.68□□□□□ -0.06
Tnfrsf9P20334 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Tnfrsf9P20334 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Tnfrsf9P20334 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Tnfrsf9P20334 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC14.68□□□□□ -0.06
Tnfrsf9P20334 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Tnfrsf9P20334 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Tnfrsf9P20334 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Tnfrsf9P20334 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Tnfrsf9P20334 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC14.68□□□□□ -0.06
Tnfrsf9P20334 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Tnfrsf9P20334 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Tnfrsf9P20334 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Tnfrsf9P20334 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Tnfrsf9P20334 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC14.68□□□□□ -0.06
Tnfrsf9P20334 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Tnfrsf9P20334 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Tnfrsf9P20334 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Tnfrsf9P20334 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Tnfrsf9P20334 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Tnfrsf9P20334 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Tnfrsf9P20334 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Tnfrsf9P20334 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Tnfrsf9P20334 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Tnfrsf9P20334 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC14.67□□□□□ -0.06
Tnfrsf9P20334 Cdkn3-203ENSMUST00000227149 1952 ntBASIC14.67□□□□□ -0.06
Tnfrsf9P20334 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Tnfrsf9P20334 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Tnfrsf9P20334 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC14.67□□□□□ -0.06
Tnfrsf9P20334 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Tnfrsf9P20334 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Tnfrsf9P20334 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Tnfrsf9P20334 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Tnfrsf9P20334 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Tnfrsf9P20334 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Tnfrsf9P20334 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Tnfrsf9P20334 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Tnfrsf9P20334 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC14.67□□□□□ -0.06
Tnfrsf9P20334 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Tnfrsf9P20334 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC14.67□□□□□ -0.06
Tnfrsf9P20334 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Tnfrsf9P20334 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Tnfrsf9P20334 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Tnfrsf9P20334 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Tnfrsf9P20334 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Tnfrsf9P20334 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Tnfrsf9P20334 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC14.66□□□□□ -0.06
Tnfrsf9P20334 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Tnfrsf9P20334 Gm7860-201ENSMUST00000121190 879 ntBASIC14.66□□□□□ -0.06
Tnfrsf9P20334 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Tnfrsf9P20334 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC14.66□□□□□ -0.06
Tnfrsf9P20334 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Tnfrsf9P20334 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC14.66□□□□□ -0.06
Tnfrsf9P20334 AC154649.1-201ENSMUST00000227392 384 ntBASIC14.66□□□□□ -0.06
Tnfrsf9P20334 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC14.66□□□□□ -0.06
Tnfrsf9P20334 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Tnfrsf9P20334 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Tnfrsf9P20334 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Tnfrsf9P20334 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Tnfrsf9P20334 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Tnfrsf9P20334 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Tnfrsf9P20334 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Tnfrsf9P20334 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Tnfrsf9P20334 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Tnfrsf9P20334 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC14.65□□□□□ -0.06
Tnfrsf9P20334 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Tnfrsf9P20334 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Tnfrsf9P20334 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Tnfrsf9P20334 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Tnfrsf9P20334 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC14.65□□□□□ -0.06
Tnfrsf9P20334 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC14.65□□□□□ -0.06
Tnfrsf9P20334 Gm37055-201ENSMUST00000191866 133 ntBASIC14.65□□□□□ -0.06
Tnfrsf9P20334 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC14.65□□□□□ -0.06
Tnfrsf9P20334 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms