Protein–RNA interactions for Protein: P10629

Hoxc6, Homeobox protein Hox-C6, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc6P10629 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Hoxc6P10629 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Hoxc6P10629 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Hoxc6P10629 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC20.2■□□□□ 0.82
Hoxc6P10629 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Hoxc6P10629 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC20.19■□□□□ 0.82
Hoxc6P10629 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Hoxc6P10629 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC20.19■□□□□ 0.82
Hoxc6P10629 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC20.19■□□□□ 0.82
Hoxc6P10629 Gm18959-201ENSMUST00000208954 655 ntBASIC20.19■□□□□ 0.82
Hoxc6P10629 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Hoxc6P10629 Gm7367-201ENSMUST00000057611 492 ntBASIC20.19■□□□□ 0.82
Hoxc6P10629 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Hoxc6P10629 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC20.19■□□□□ 0.82
Hoxc6P10629 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Hoxc6P10629 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Hoxc6P10629 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Hoxc6P10629 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Hoxc6P10629 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Hoxc6P10629 Mir2861-201ENSMUST00000175539 82 ntBASIC20.18■□□□□ 0.82
Hoxc6P10629 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Hoxc6P10629 Gm18032-201ENSMUST00000222541 538 ntBASIC20.18■□□□□ 0.82
Hoxc6P10629 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Hoxc6P10629 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Hoxc6P10629 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC20.18■□□□□ 0.82
Hoxc6P10629 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Hoxc6P10629 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Hoxc6P10629 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC20.17■□□□□ 0.82
Hoxc6P10629 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Hoxc6P10629 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Hoxc6P10629 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Hoxc6P10629 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Hoxc6P10629 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC20.17■□□□□ 0.82
Hoxc6P10629 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Hoxc6P10629 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Hoxc6P10629 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Hoxc6P10629 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Hoxc6P10629 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Hoxc6P10629 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Hoxc6P10629 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
Hoxc6P10629 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Hoxc6P10629 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Hoxc6P10629 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Hoxc6P10629 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Hoxc6P10629 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Hoxc6P10629 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Hoxc6P10629 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Hoxc6P10629 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Hoxc6P10629 Gm23634-201ENSMUST00000175071 91 ntBASIC20.15■□□□□ 0.82
Hoxc6P10629 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC20.15■□□□□ 0.82
Hoxc6P10629 Gm45058-201ENSMUST00000205810 766 ntBASIC20.15■□□□□ 0.82
Hoxc6P10629 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Hoxc6P10629 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Hoxc6P10629 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Hoxc6P10629 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Hoxc6P10629 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Hoxc6P10629 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Hoxc6P10629 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Hoxc6P10629 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Hoxc6P10629 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Hoxc6P10629 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Hoxc6P10629 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Hoxc6P10629 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Hoxc6P10629 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Hoxc6P10629 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Hoxc6P10629 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC20.14■□□□□ 0.81
Hoxc6P10629 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
Hoxc6P10629 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Hoxc6P10629 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Hoxc6P10629 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Hoxc6P10629 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC20.14■□□□□ 0.81
Hoxc6P10629 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Hoxc6P10629 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
Hoxc6P10629 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Hoxc6P10629 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Hoxc6P10629 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC20.13■□□□□ 0.81
Hoxc6P10629 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Hoxc6P10629 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC20.13■□□□□ 0.81
Hoxc6P10629 Gm27463-201ENSMUST00000183569 57 ntBASIC20.13■□□□□ 0.81
Hoxc6P10629 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC20.13■□□□□ 0.81
Hoxc6P10629 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Hoxc6P10629 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Hoxc6P10629 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC20.13■□□□□ 0.81
Hoxc6P10629 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Hoxc6P10629 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Hoxc6P10629 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC20.13■□□□□ 0.81
Hoxc6P10629 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Hoxc6P10629 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
Hoxc6P10629 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Hoxc6P10629 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC20.12■□□□□ 0.81
Hoxc6P10629 Gm10013-201ENSMUST00000106074 672 ntBASIC20.12■□□□□ 0.81
Hoxc6P10629 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Hoxc6P10629 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
Hoxc6P10629 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Hoxc6P10629 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC20.12■□□□□ 0.81
Hoxc6P10629 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC20.12■□□□□ 0.81
Hoxc6P10629 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Hoxc6P10629 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
Hoxc6P10629 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Hoxc6P10629 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms