Protein–RNA interactions for Protein: P09025

Hoxc8, Homeobox protein Hox-C8, mousemouse

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc8P09025 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Hoxc8P09025 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Hoxc8P09025 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
Hoxc8P09025 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Hoxc8P09025 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Hoxc8P09025 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Hoxc8P09025 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Hoxc8P09025 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC19.44■□□□□ 0.7
Hoxc8P09025 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Hoxc8P09025 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Hoxc8P09025 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Hoxc8P09025 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Hoxc8P09025 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC19.44■□□□□ 0.7
Hoxc8P09025 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC19.44■□□□□ 0.7
Hoxc8P09025 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Hoxc8P09025 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Hoxc8P09025 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Hoxc8P09025 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC19.44■□□□□ 0.7
Hoxc8P09025 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Hoxc8P09025 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Hoxc8P09025 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Hoxc8P09025 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Hoxc8P09025 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC19.44■□□□□ 0.7
Hoxc8P09025 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC19.44■□□□□ 0.7
Hoxc8P09025 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Hoxc8P09025 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Hoxc8P09025 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC19.43■□□□□ 0.7
Hoxc8P09025 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Hoxc8P09025 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC19.43■□□□□ 0.7
Hoxc8P09025 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Hoxc8P09025 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Hoxc8P09025 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Hoxc8P09025 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Hoxc8P09025 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Hoxc8P09025 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Hoxc8P09025 Gm12085-201ENSMUST00000119263 940 ntBASIC19.42■□□□□ 0.7
Hoxc8P09025 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Hoxc8P09025 Gm18032-201ENSMUST00000222541 538 ntBASIC19.42■□□□□ 0.7
Hoxc8P09025 AC159205.6-201ENSMUST00000224935 887 ntBASIC19.42■□□□□ 0.7
Hoxc8P09025 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Hoxc8P09025 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Hoxc8P09025 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Hoxc8P09025 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Hoxc8P09025 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Hoxc8P09025 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
Hoxc8P09025 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Hoxc8P09025 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC19.41■□□□□ 0.7
Hoxc8P09025 Gm27463-201ENSMUST00000183569 57 ntBASIC19.41■□□□□ 0.7
Hoxc8P09025 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC19.41■□□□□ 0.7
Hoxc8P09025 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Hoxc8P09025 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Hoxc8P09025 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Hoxc8P09025 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Hoxc8P09025 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Hoxc8P09025 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Hoxc8P09025 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC19.4■□□□□ 0.7
Hoxc8P09025 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC19.4■□□□□ 0.7
Hoxc8P09025 Gm18959-201ENSMUST00000208954 655 ntBASIC19.4■□□□□ 0.7
Hoxc8P09025 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Hoxc8P09025 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Hoxc8P09025 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Hoxc8P09025 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Hoxc8P09025 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Hoxc8P09025 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Hoxc8P09025 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Hoxc8P09025 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Hoxc8P09025 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Hoxc8P09025 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC19.39■□□□□ 0.69
Hoxc8P09025 Gm43353-201ENSMUST00000199224 1295 ntBASIC19.39■□□□□ 0.69
Hoxc8P09025 Gm45058-201ENSMUST00000205810 766 ntBASIC19.39■□□□□ 0.69
Hoxc8P09025 Gm4974-201ENSMUST00000209974 875 ntBASIC19.39■□□□□ 0.69
Hoxc8P09025 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC19.39■□□□□ 0.69
Hoxc8P09025 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Hoxc8P09025 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC19.39■□□□□ 0.69
Hoxc8P09025 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Hoxc8P09025 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Hoxc8P09025 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Hoxc8P09025 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Hoxc8P09025 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Hoxc8P09025 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Hoxc8P09025 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Hoxc8P09025 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Hoxc8P09025 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Hoxc8P09025 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC19.38■□□□□ 0.69
Hoxc8P09025 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Hoxc8P09025 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Hoxc8P09025 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Hoxc8P09025 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Hoxc8P09025 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
Hoxc8P09025 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC19.37■□□□□ 0.69
Hoxc8P09025 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Hoxc8P09025 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Hoxc8P09025 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Hoxc8P09025 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Hoxc8P09025 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Hoxc8P09025 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
Hoxc8P09025 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Hoxc8P09025 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Hoxc8P09025 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
Hoxc8P09025 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms