Protein–RNA interactions for Protein: P08122

Col4a2, Collagen alpha-2(IV) chain, mousemouse

Predictions only

Length 1,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a2P08122 Gm10459-201ENSMUST00000202708 1155 ntBASIC17.02■□□□□ 0.32
Col4a2P08122 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Col4a2P08122 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Col4a2P08122 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Col4a2P08122 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.32
Col4a2P08122 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Col4a2P08122 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Col4a2P08122 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Col4a2P08122 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Col4a2P08122 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
Col4a2P08122 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Col4a2P08122 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Col4a2P08122 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Col4a2P08122 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Col4a2P08122 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Col4a2P08122 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Col4a2P08122 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Col4a2P08122 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC17.01■□□□□ 0.31
Col4a2P08122 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC17.01■□□□□ 0.31
Col4a2P08122 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Col4a2P08122 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Col4a2P08122 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC17■□□□□ 0.31
Col4a2P08122 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Col4a2P08122 Gm6627-201ENSMUST00000218299 2386 ntBASIC17■□□□□ 0.31
Col4a2P08122 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC17■□□□□ 0.31
Col4a2P08122 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC17■□□□□ 0.31
Col4a2P08122 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Col4a2P08122 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Col4a2P08122 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC17■□□□□ 0.31
Col4a2P08122 Gm21362-201ENSMUST00000194272 928 ntBASIC17■□□□□ 0.31
Col4a2P08122 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Col4a2P08122 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC17■□□□□ 0.31
Col4a2P08122 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Col4a2P08122 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Col4a2P08122 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Col4a2P08122 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Col4a2P08122 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Col4a2P08122 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Col4a2P08122 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Col4a2P08122 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Col4a2P08122 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Col4a2P08122 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC16.99■□□□□ 0.31
Col4a2P08122 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Col4a2P08122 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Col4a2P08122 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Col4a2P08122 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Col4a2P08122 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Col4a2P08122 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Col4a2P08122 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC16.98■□□□□ 0.31
Col4a2P08122 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Col4a2P08122 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Col4a2P08122 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Col4a2P08122 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Col4a2P08122 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Col4a2P08122 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Col4a2P08122 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Col4a2P08122 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC16.98■□□□□ 0.31
Col4a2P08122 Gm18959-201ENSMUST00000208954 655 ntBASIC16.98■□□□□ 0.31
Col4a2P08122 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Col4a2P08122 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC16.98■□□□□ 0.31
Col4a2P08122 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Col4a2P08122 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Col4a2P08122 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Col4a2P08122 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Col4a2P08122 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Col4a2P08122 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC16.98■□□□□ 0.31
Col4a2P08122 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Col4a2P08122 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Col4a2P08122 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Col4a2P08122 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Col4a2P08122 Gm5112-201ENSMUST00000204407 2368 ntBASIC16.97■□□□□ 0.31
Col4a2P08122 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Col4a2P08122 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Col4a2P08122 Gm9194-201ENSMUST00000220749 1447 ntBASIC16.97■□□□□ 0.31
Col4a2P08122 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Col4a2P08122 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Col4a2P08122 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Col4a2P08122 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC16.96■□□□□ 0.31
Col4a2P08122 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Col4a2P08122 Mir2861-201ENSMUST00000175539 82 ntBASIC16.96■□□□□ 0.31
Col4a2P08122 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
Col4a2P08122 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC16.96■□□□□ 0.31
Col4a2P08122 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Col4a2P08122 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Col4a2P08122 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Col4a2P08122 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Col4a2P08122 Gm44544-201ENSMUST00000207052 1844 ntBASIC16.96■□□□□ 0.31
Col4a2P08122 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
Col4a2P08122 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Col4a2P08122 Gm6728-201ENSMUST00000178117 1065 ntBASIC16.96■□□□□ 0.3
Col4a2P08122 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Col4a2P08122 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Col4a2P08122 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Col4a2P08122 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
Col4a2P08122 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Col4a2P08122 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Col4a2P08122 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Col4a2P08122 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Col4a2P08122 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Col4a2P08122 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC16.95■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms