Protein–RNA interactions for Protein: P05622

Pdgfrb, Platelet-derived growth factor receptor beta, mousemouse

Predictions only

Length 1,098 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdgfrbP05622 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PdgfrbP05622 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PdgfrbP05622 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
PdgfrbP05622 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC18.3■□□□□ 0.52
PdgfrbP05622 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PdgfrbP05622 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
PdgfrbP05622 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PdgfrbP05622 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PdgfrbP05622 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PdgfrbP05622 Gm12933-201ENSMUST00000120203 872 ntBASIC18.3■□□□□ 0.52
PdgfrbP05622 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PdgfrbP05622 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PdgfrbP05622 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
PdgfrbP05622 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
PdgfrbP05622 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC18.3■□□□□ 0.52
PdgfrbP05622 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
PdgfrbP05622 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
PdgfrbP05622 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PdgfrbP05622 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
PdgfrbP05622 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
PdgfrbP05622 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PdgfrbP05622 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PdgfrbP05622 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PdgfrbP05622 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PdgfrbP05622 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
PdgfrbP05622 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
PdgfrbP05622 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC18.29■□□□□ 0.52
PdgfrbP05622 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PdgfrbP05622 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PdgfrbP05622 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
PdgfrbP05622 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC18.29■□□□□ 0.52
PdgfrbP05622 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
PdgfrbP05622 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
PdgfrbP05622 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
PdgfrbP05622 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
PdgfrbP05622 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
PdgfrbP05622 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PdgfrbP05622 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC18.29■□□□□ 0.52
PdgfrbP05622 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC18.29■□□□□ 0.52
PdgfrbP05622 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
PdgfrbP05622 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC18.29■□□□□ 0.52
PdgfrbP05622 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
PdgfrbP05622 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
PdgfrbP05622 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC18.29■□□□□ 0.52
PdgfrbP05622 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PdgfrbP05622 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PdgfrbP05622 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PdgfrbP05622 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PdgfrbP05622 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PdgfrbP05622 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
PdgfrbP05622 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PdgfrbP05622 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC18.28■□□□□ 0.52
PdgfrbP05622 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PdgfrbP05622 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
PdgfrbP05622 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
PdgfrbP05622 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
PdgfrbP05622 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
PdgfrbP05622 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PdgfrbP05622 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC18.28■□□□□ 0.52
PdgfrbP05622 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PdgfrbP05622 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PdgfrbP05622 Gm38345-201ENSMUST00000192635 1748 ntBASIC18.27■□□□□ 0.52
PdgfrbP05622 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PdgfrbP05622 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PdgfrbP05622 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PdgfrbP05622 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PdgfrbP05622 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PdgfrbP05622 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PdgfrbP05622 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC18.27■□□□□ 0.52
PdgfrbP05622 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
PdgfrbP05622 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PdgfrbP05622 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
PdgfrbP05622 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC18.26■□□□□ 0.51
PdgfrbP05622 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
PdgfrbP05622 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC18.26■□□□□ 0.51
PdgfrbP05622 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PdgfrbP05622 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
PdgfrbP05622 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
PdgfrbP05622 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC18.26■□□□□ 0.51
PdgfrbP05622 Gm26524-201ENSMUST00000192339 390 ntBASIC18.26■□□□□ 0.51
PdgfrbP05622 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PdgfrbP05622 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PdgfrbP05622 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
PdgfrbP05622 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PdgfrbP05622 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
PdgfrbP05622 Gm42939-201ENSMUST00000197514 2205 ntBASIC18.26■□□□□ 0.51
PdgfrbP05622 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC18.26■□□□□ 0.51
PdgfrbP05622 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
PdgfrbP05622 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PdgfrbP05622 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC18.26■□□□□ 0.51
PdgfrbP05622 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
PdgfrbP05622 Tgds-204ENSMUST00000228543 1594 ntBASIC18.25■□□□□ 0.51
PdgfrbP05622 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
PdgfrbP05622 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
PdgfrbP05622 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
PdgfrbP05622 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PdgfrbP05622 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
PdgfrbP05622 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
PdgfrbP05622 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
PdgfrbP05622 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC18.25■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms