Protein–RNA interactions for Protein: P04213

T-cell receptor beta chain V region C5 (Fragment), mousemouse

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04213 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
P04213 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
P04213 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
P04213 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
P04213 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
P04213 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC17.39■□□□□ 0.37
P04213 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
P04213 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
P04213 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
P04213 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
P04213 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
P04213 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC17.38■□□□□ 0.37
P04213 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC17.38■□□□□ 0.37
P04213 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
P04213 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
P04213 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
P04213 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
P04213 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
P04213 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
P04213 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
P04213 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
P04213 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC17.37■□□□□ 0.37
P04213 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC17.37■□□□□ 0.37
P04213 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
P04213 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
P04213 Gm6365-201ENSMUST00000054711 744 ntBASIC17.37■□□□□ 0.37
P04213 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
P04213 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
P04213 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
P04213 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
P04213 Gm37374-201ENSMUST00000194954 1829 ntBASIC17.37■□□□□ 0.37
P04213 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
P04213 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
P04213 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
P04213 Gm43702-201ENSMUST00000198772 2546 ntBASIC17.36■□□□□ 0.37
P04213 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC17.36■□□□□ 0.37
P04213 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
P04213 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
P04213 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
P04213 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC17.36■□□□□ 0.37
P04213 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
P04213 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
P04213 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
P04213 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
P04213 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
P04213 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
P04213 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC17.35■□□□□ 0.37
P04213 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
P04213 Gm7291-201ENSMUST00000199147 382 ntBASIC17.35■□□□□ 0.37
P04213 Gm42569-201ENSMUST00000200539 472 ntBASIC17.35■□□□□ 0.37
P04213 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC17.35■□□□□ 0.37
P04213 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
P04213 Gm13509-201ENSMUST00000119733 1308 ntBASIC17.35■□□□□ 0.37
P04213 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
P04213 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
P04213 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
P04213 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
P04213 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
P04213 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
P04213 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC17.34■□□□□ 0.37
P04213 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
P04213 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
P04213 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
P04213 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC17.34■□□□□ 0.37
P04213 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
P04213 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC17.34■□□□□ 0.37
P04213 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
P04213 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC17.34■□□□□ 0.37
P04213 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC17.34■□□□□ 0.37
P04213 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
P04213 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
P04213 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
P04213 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC17.34■□□□□ 0.37
P04213 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
P04213 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
P04213 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
P04213 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
P04213 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
P04213 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
P04213 Fcho2-208ENSMUST00000224992 2964 ntBASIC17.33■□□□□ 0.37
P04213 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
P04213 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC17.33■□□□□ 0.36
P04213 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
P04213 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
P04213 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
P04213 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
P04213 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
P04213 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
P04213 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
P04213 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
P04213 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
P04213 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
P04213 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
P04213 Gm37563-201ENSMUST00000192580 1513 ntBASIC17.32■□□□□ 0.36
P04213 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
P04213 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
P04213 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
P04213 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
P04213 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
P04213 Gm42555-201ENSMUST00000199304 1039 ntBASIC17.32■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms