Protein–RNA interactions for Protein: P02831

Hoxa3, Homeobox protein Hox-A3, mousemouse

Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa3P02831 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Hoxa3P02831 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Hoxa3P02831 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Hoxa3P02831 Gm18688-201ENSMUST00000204695 1859 ntBASIC15.16■□□□□ 0.02
Hoxa3P02831 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
Hoxa3P02831 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Hoxa3P02831 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Hoxa3P02831 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Hoxa3P02831 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Hoxa3P02831 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Hoxa3P02831 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Hoxa3P02831 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Hoxa3P02831 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Hoxa3P02831 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Hoxa3P02831 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Hoxa3P02831 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Hoxa3P02831 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Hoxa3P02831 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Hoxa3P02831 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC15.16■□□□□ 0.02
Hoxa3P02831 Gm10252-201ENSMUST00000209541 832 ntBASIC15.16■□□□□ 0.02
Hoxa3P02831 AC160393.1-201ENSMUST00000218378 1279 ntBASIC15.16■□□□□ 0.02
Hoxa3P02831 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Hoxa3P02831 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Hoxa3P02831 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Hoxa3P02831 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Hoxa3P02831 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Hoxa3P02831 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Hoxa3P02831 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Hoxa3P02831 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Hoxa3P02831 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Hoxa3P02831 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Hoxa3P02831 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Hoxa3P02831 Gm11249-201ENSMUST00000117071 859 ntBASIC15.15■□□□□ 0.02
Hoxa3P02831 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Hoxa3P02831 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC15.15■□□□□ 0.02
Hoxa3P02831 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Hoxa3P02831 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Hoxa3P02831 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Hoxa3P02831 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Hoxa3P02831 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Hoxa3P02831 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Hoxa3P02831 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Hoxa3P02831 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Hoxa3P02831 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Hoxa3P02831 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC15.14■□□□□ 0.01
Hoxa3P02831 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC15.14■□□□□ 0.01
Hoxa3P02831 AC140264.2-202ENSMUST00000218746 817 ntBASIC15.14■□□□□ 0.01
Hoxa3P02831 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Hoxa3P02831 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Hoxa3P02831 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Hoxa3P02831 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Hoxa3P02831 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC15.14■□□□□ 0.01
Hoxa3P02831 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Hoxa3P02831 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Hoxa3P02831 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC15.14■□□□□ 0.01
Hoxa3P02831 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Hoxa3P02831 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Hoxa3P02831 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
Hoxa3P02831 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Hoxa3P02831 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Hoxa3P02831 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Hoxa3P02831 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Hoxa3P02831 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Hoxa3P02831 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Hoxa3P02831 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Hoxa3P02831 Gm2399-201ENSMUST00000104944 225 ntBASIC15.13■□□□□ 0.01
Hoxa3P02831 Gm5643-201ENSMUST00000117081 966 ntBASIC15.13■□□□□ 0.01
Hoxa3P02831 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Hoxa3P02831 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC15.13■□□□□ 0.01
Hoxa3P02831 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Hoxa3P02831 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Hoxa3P02831 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Hoxa3P02831 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC15.13■□□□□ 0.01
Hoxa3P02831 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC15.13■□□□□ 0.01
Hoxa3P02831 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Hoxa3P02831 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
Hoxa3P02831 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Hoxa3P02831 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Hoxa3P02831 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Hoxa3P02831 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Hoxa3P02831 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Hoxa3P02831 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Hoxa3P02831 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Hoxa3P02831 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Hoxa3P02831 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Hoxa3P02831 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Hoxa3P02831 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC15.12■□□□□ 0.01
Hoxa3P02831 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Hoxa3P02831 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Hoxa3P02831 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Hoxa3P02831 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Hoxa3P02831 Gm8309-201ENSMUST00000206627 1448 ntBASIC15.12■□□□□ 0.01
Hoxa3P02831 Rarb-207ENSMUST00000225921 2756 ntBASIC15.12■□□□□ 0.01
Hoxa3P02831 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC15.12■□□□□ 0.01
Hoxa3P02831 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Hoxa3P02831 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Hoxa3P02831 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC15.12■□□□□ 0.01
Hoxa3P02831 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Hoxa3P02831 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC15.12■□□□□ 0.01
Hoxa3P02831 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms