Protein–RNA interactions for Protein: O89090

Sp1, Transcription factor Sp1, mousemouse

Predictions only

Length 784 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp1O89090 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sp1O89090 Gm43213-201ENSMUST00000151866 1790 ntBASIC18.35■□□□□ 0.53
Sp1O89090 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sp1O89090 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC18.35■□□□□ 0.53
Sp1O89090 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sp1O89090 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sp1O89090 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Sp1O89090 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC18.35■□□□□ 0.53
Sp1O89090 Gm6576-201ENSMUST00000169678 883 ntBASIC18.35■□□□□ 0.53
Sp1O89090 Gm42545-201ENSMUST00000202755 922 ntBASIC18.35■□□□□ 0.53
Sp1O89090 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Sp1O89090 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sp1O89090 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sp1O89090 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sp1O89090 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Sp1O89090 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sp1O89090 Gm10616-201ENSMUST00000205285 2127 ntBASIC18.35■□□□□ 0.53
Sp1O89090 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sp1O89090 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sp1O89090 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sp1O89090 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Sp1O89090 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sp1O89090 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sp1O89090 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sp1O89090 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sp1O89090 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Sp1O89090 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Sp1O89090 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC18.34■□□□□ 0.53
Sp1O89090 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sp1O89090 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Sp1O89090 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Sp1O89090 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sp1O89090 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sp1O89090 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Sp1O89090 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.53
Sp1O89090 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC18.33■□□□□ 0.53
Sp1O89090 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Sp1O89090 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Sp1O89090 Mir6349-201ENSMUST00000184059 97 ntBASIC18.33■□□□□ 0.52
Sp1O89090 Gm43183-201ENSMUST00000200632 547 ntBASIC18.33■□□□□ 0.52
Sp1O89090 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Sp1O89090 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
Sp1O89090 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Sp1O89090 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Sp1O89090 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Sp1O89090 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC18.33■□□□□ 0.52
Sp1O89090 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sp1O89090 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Sp1O89090 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Sp1O89090 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sp1O89090 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC18.32■□□□□ 0.52
Sp1O89090 Mir1199-201ENSMUST00000117015 119 ntBASIC18.32■□□□□ 0.52
Sp1O89090 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC18.32■□□□□ 0.52
Sp1O89090 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC18.32■□□□□ 0.52
Sp1O89090 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC18.32■□□□□ 0.52
Sp1O89090 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Sp1O89090 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Sp1O89090 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC18.32■□□□□ 0.52
Sp1O89090 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Sp1O89090 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Sp1O89090 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sp1O89090 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Sp1O89090 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sp1O89090 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sp1O89090 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sp1O89090 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sp1O89090 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sp1O89090 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC18.31■□□□□ 0.52
Sp1O89090 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC18.31■□□□□ 0.52
Sp1O89090 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sp1O89090 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sp1O89090 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC18.31■□□□□ 0.52
Sp1O89090 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sp1O89090 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
Sp1O89090 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sp1O89090 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC18.31■□□□□ 0.52
Sp1O89090 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC18.31■□□□□ 0.52
Sp1O89090 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC18.31■□□□□ 0.52
Sp1O89090 Gm37292-201ENSMUST00000192062 758 ntBASIC18.31■□□□□ 0.52
Sp1O89090 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC18.31■□□□□ 0.52
Sp1O89090 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sp1O89090 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sp1O89090 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Sp1O89090 Gm10654-201ENSMUST00000098653 1633 ntBASIC18.31■□□□□ 0.52
Sp1O89090 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sp1O89090 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Sp1O89090 Tgds-204ENSMUST00000228543 1594 ntBASIC18.3■□□□□ 0.52
Sp1O89090 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sp1O89090 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sp1O89090 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Sp1O89090 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sp1O89090 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sp1O89090 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Sp1O89090 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC18.3■□□□□ 0.52
Sp1O89090 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sp1O89090 Mir2861-201ENSMUST00000175539 82 ntBASIC18.3■□□□□ 0.52
Sp1O89090 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC18.3■□□□□ 0.52
Sp1O89090 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sp1O89090 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Sp1O89090 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms