Protein–RNA interactions for Protein: O89079

Cope, Coatomer subunit epsilon, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopeO89079 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CopeO89079 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CopeO89079 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CopeO89079 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC18.74■□□□□ 0.59
CopeO89079 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CopeO89079 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CopeO89079 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CopeO89079 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CopeO89079 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC18.74■□□□□ 0.59
CopeO89079 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CopeO89079 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CopeO89079 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CopeO89079 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
CopeO89079 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CopeO89079 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CopeO89079 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CopeO89079 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC18.73■□□□□ 0.59
CopeO89079 Gm6139-201ENSMUST00000079261 882 ntBASIC18.73■□□□□ 0.59
CopeO89079 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC18.73■□□□□ 0.59
CopeO89079 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC18.73■□□□□ 0.59
CopeO89079 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CopeO89079 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CopeO89079 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC18.73■□□□□ 0.59
CopeO89079 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CopeO89079 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CopeO89079 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CopeO89079 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CopeO89079 Gm19439-201ENSMUST00000198195 2273 ntBASIC18.72■□□□□ 0.59
CopeO89079 Fcho2-208ENSMUST00000224992 2964 ntBASIC18.72■□□□□ 0.59
CopeO89079 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CopeO89079 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CopeO89079 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC18.72■□□□□ 0.59
CopeO89079 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC18.72■□□□□ 0.59
CopeO89079 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CopeO89079 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
CopeO89079 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CopeO89079 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CopeO89079 Gm8309-201ENSMUST00000206627 1448 ntBASIC18.72■□□□□ 0.59
CopeO89079 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CopeO89079 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CopeO89079 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC18.72■□□□□ 0.59
CopeO89079 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CopeO89079 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
CopeO89079 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CopeO89079 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CopeO89079 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CopeO89079 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC18.71■□□□□ 0.59
CopeO89079 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CopeO89079 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CopeO89079 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CopeO89079 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC18.71■□□□□ 0.59
CopeO89079 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CopeO89079 Gm27454-201ENSMUST00000185090 204 ntBASIC18.71■□□□□ 0.59
CopeO89079 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CopeO89079 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CopeO89079 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CopeO89079 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
CopeO89079 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CopeO89079 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CopeO89079 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CopeO89079 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC18.7■□□□□ 0.58
CopeO89079 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CopeO89079 Appbp2os-202ENSMUST00000206972 447 ntBASIC18.7■□□□□ 0.58
CopeO89079 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
CopeO89079 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CopeO89079 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CopeO89079 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC18.7■□□□□ 0.58
CopeO89079 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CopeO89079 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CopeO89079 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CopeO89079 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CopeO89079 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CopeO89079 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CopeO89079 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CopeO89079 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CopeO89079 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CopeO89079 Tgds-204ENSMUST00000228543 1594 ntBASIC18.69■□□□□ 0.58
CopeO89079 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
CopeO89079 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
CopeO89079 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CopeO89079 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
CopeO89079 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
CopeO89079 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC18.69■□□□□ 0.58
CopeO89079 Zcchc6-207ENSMUST00000225576 2499 ntBASIC18.69■□□□□ 0.58
CopeO89079 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CopeO89079 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC18.69■□□□□ 0.58
CopeO89079 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC18.69■□□□□ 0.58
CopeO89079 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CopeO89079 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC18.69■□□□□ 0.58
CopeO89079 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
CopeO89079 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CopeO89079 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
CopeO89079 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CopeO89079 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CopeO89079 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CopeO89079 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CopeO89079 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CopeO89079 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CopeO89079 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CopeO89079 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms