Protein–RNA interactions for Protein: O88870

Best1, Bestrophin-1, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Best1O88870 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Best1O88870 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Best1O88870 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Best1O88870 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Best1O88870 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Best1O88870 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Best1O88870 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Best1O88870 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Best1O88870 Gm10616-201ENSMUST00000205285 2127 ntBASIC17.44■□□□□ 0.38
Best1O88870 Gm10654-201ENSMUST00000098653 1633 ntBASIC17.44■□□□□ 0.38
Best1O88870 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Best1O88870 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Best1O88870 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Best1O88870 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC17.44■□□□□ 0.38
Best1O88870 Gm11643-201ENSMUST00000119578 864 ntBASIC17.44■□□□□ 0.38
Best1O88870 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Best1O88870 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
Best1O88870 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC17.44■□□□□ 0.38
Best1O88870 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Best1O88870 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Best1O88870 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Best1O88870 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC17.43■□□□□ 0.38
Best1O88870 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Best1O88870 Gm715-201ENSMUST00000117865 831 ntBASIC17.43■□□□□ 0.38
Best1O88870 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC17.43■□□□□ 0.38
Best1O88870 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Best1O88870 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Best1O88870 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Best1O88870 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Best1O88870 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Best1O88870 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Best1O88870 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Best1O88870 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Best1O88870 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Best1O88870 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Best1O88870 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Best1O88870 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Best1O88870 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Best1O88870 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Best1O88870 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC17.42■□□□□ 0.38
Best1O88870 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC17.42■□□□□ 0.38
Best1O88870 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC17.42■□□□□ 0.38
Best1O88870 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Best1O88870 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC17.42■□□□□ 0.38
Best1O88870 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC17.42■□□□□ 0.38
Best1O88870 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Best1O88870 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Best1O88870 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC17.42■□□□□ 0.38
Best1O88870 AC108858.1-201ENSMUST00000228461 1498 ntBASIC17.42■□□□□ 0.38
Best1O88870 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Best1O88870 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Best1O88870 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Best1O88870 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Best1O88870 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC17.41■□□□□ 0.38
Best1O88870 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Best1O88870 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Best1O88870 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC17.41■□□□□ 0.38
Best1O88870 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Best1O88870 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Best1O88870 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC17.41■□□□□ 0.38
Best1O88870 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Best1O88870 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Best1O88870 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Best1O88870 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Best1O88870 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Best1O88870 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Best1O88870 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Best1O88870 Gm12382-201ENSMUST00000122005 922 ntBASIC17.4■□□□□ 0.38
Best1O88870 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC17.4■□□□□ 0.38
Best1O88870 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC17.4■□□□□ 0.38
Best1O88870 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Best1O88870 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC17.4■□□□□ 0.38
Best1O88870 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Best1O88870 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Best1O88870 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Best1O88870 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Best1O88870 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Best1O88870 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Best1O88870 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Best1O88870 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Best1O88870 Gm10418-201ENSMUST00000100943 576 ntBASIC17.39■□□□□ 0.37
Best1O88870 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Best1O88870 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Best1O88870 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Best1O88870 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Best1O88870 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Best1O88870 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC17.39■□□□□ 0.37
Best1O88870 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Best1O88870 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Best1O88870 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Best1O88870 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Best1O88870 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Best1O88870 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Best1O88870 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Best1O88870 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC17.38■□□□□ 0.37
Best1O88870 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Best1O88870 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Best1O88870 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC17.38■□□□□ 0.37
Best1O88870 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Best1O88870 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms