Protein–RNA interactions for Protein: O88696

Clpp, ATP-dependent Clp protease proteolytic subunit, mitochondrial, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClppO88696 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC17.63■□□□□ 0.41
ClppO88696 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ClppO88696 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
ClppO88696 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
ClppO88696 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
ClppO88696 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ClppO88696 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC17.62■□□□□ 0.41
ClppO88696 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC17.62■□□□□ 0.41
ClppO88696 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC17.62■□□□□ 0.41
ClppO88696 Gm44549-201ENSMUST00000208351 577 ntBASIC17.62■□□□□ 0.41
ClppO88696 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC17.62■□□□□ 0.41
ClppO88696 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
ClppO88696 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ClppO88696 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ClppO88696 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
ClppO88696 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC17.62■□□□□ 0.41
ClppO88696 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
ClppO88696 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ClppO88696 Gm20100-201ENSMUST00000209418 2272 ntBASIC17.61■□□□□ 0.41
ClppO88696 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
ClppO88696 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ClppO88696 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ClppO88696 Gm12896-201ENSMUST00000118430 226 ntBASIC17.61■□□□□ 0.41
ClppO88696 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC17.61■□□□□ 0.41
ClppO88696 AC160393.1-201ENSMUST00000218378 1279 ntBASIC17.61■□□□□ 0.41
ClppO88696 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
ClppO88696 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
ClppO88696 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ClppO88696 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ClppO88696 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
ClppO88696 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ClppO88696 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
ClppO88696 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ClppO88696 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
ClppO88696 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
ClppO88696 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC17.6■□□□□ 0.41
ClppO88696 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ClppO88696 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC17.6■□□□□ 0.41
ClppO88696 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ClppO88696 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
ClppO88696 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
ClppO88696 Dio3-201ENSMUST00000097228 1449 ntBASIC17.6■□□□□ 0.41
ClppO88696 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ClppO88696 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC17.6■□□□□ 0.41
ClppO88696 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC17.6■□□□□ 0.41
ClppO88696 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ClppO88696 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
ClppO88696 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
ClppO88696 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
ClppO88696 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
ClppO88696 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
ClppO88696 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
ClppO88696 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
ClppO88696 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
ClppO88696 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC17.59■□□□□ 0.41
ClppO88696 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ClppO88696 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ClppO88696 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ClppO88696 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC17.58■□□□□ 0.41
ClppO88696 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
ClppO88696 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC17.58■□□□□ 0.4
ClppO88696 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.4
ClppO88696 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC17.58■□□□□ 0.4
ClppO88696 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
ClppO88696 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
ClppO88696 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
ClppO88696 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
ClppO88696 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
ClppO88696 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ClppO88696 Haglr-201ENSMUST00000100000 2085 ntBASIC17.57■□□□□ 0.4
ClppO88696 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ClppO88696 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ClppO88696 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
ClppO88696 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ClppO88696 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC17.57■□□□□ 0.4
ClppO88696 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
ClppO88696 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
ClppO88696 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ClppO88696 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC17.57■□□□□ 0.4
ClppO88696 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ClppO88696 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
ClppO88696 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ClppO88696 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
ClppO88696 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ClppO88696 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ClppO88696 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ClppO88696 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
ClppO88696 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ClppO88696 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC17.56■□□□□ 0.4
ClppO88696 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
ClppO88696 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ClppO88696 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ClppO88696 Gm5643-201ENSMUST00000117081 966 ntBASIC17.56■□□□□ 0.4
ClppO88696 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC17.56■□□□□ 0.4
ClppO88696 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
ClppO88696 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
ClppO88696 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ClppO88696 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ClppO88696 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ClppO88696 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms