Protein–RNA interactions for Protein: O88472

Tnfrsf17, Tumor necrosis factor receptor superfamily member 17, mousemouse

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf17O88472 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Tnfrsf17O88472 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Tnfrsf17O88472 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Tnfrsf17O88472 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC16.86■□□□□ 0.29
Tnfrsf17O88472 Gm5587-201ENSMUST00000206270 674 ntBASIC16.86■□□□□ 0.29
Tnfrsf17O88472 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC16.86■□□□□ 0.29
Tnfrsf17O88472 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Tnfrsf17O88472 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC16.86■□□□□ 0.29
Tnfrsf17O88472 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Tnfrsf17O88472 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Tnfrsf17O88472 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC16.86■□□□□ 0.29
Tnfrsf17O88472 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Tnfrsf17O88472 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Tnfrsf17O88472 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Tnfrsf17O88472 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Tnfrsf17O88472 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Tnfrsf17O88472 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Tnfrsf17O88472 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Tnfrsf17O88472 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
Tnfrsf17O88472 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Tnfrsf17O88472 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Tnfrsf17O88472 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Tnfrsf17O88472 Hsf1-207ENSMUST00000228371 2102 ntBASIC16.84■□□□□ 0.29
Tnfrsf17O88472 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC16.84■□□□□ 0.29
Tnfrsf17O88472 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Tnfrsf17O88472 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Tnfrsf17O88472 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Tnfrsf17O88472 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Tnfrsf17O88472 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC16.84■□□□□ 0.29
Tnfrsf17O88472 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Tnfrsf17O88472 Gm18958-201ENSMUST00000174258 762 ntBASIC16.84■□□□□ 0.29
Tnfrsf17O88472 Gm29518-201ENSMUST00000190858 372 ntBASIC16.84■□□□□ 0.29
Tnfrsf17O88472 Gm38027-201ENSMUST00000192315 235 ntBASIC16.84■□□□□ 0.29
Tnfrsf17O88472 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
Tnfrsf17O88472 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Tnfrsf17O88472 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Tnfrsf17O88472 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Tnfrsf17O88472 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Tnfrsf17O88472 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC16.84■□□□□ 0.29
Tnfrsf17O88472 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Tnfrsf17O88472 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
Tnfrsf17O88472 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Tnfrsf17O88472 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Tnfrsf17O88472 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
Tnfrsf17O88472 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.29
Tnfrsf17O88472 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Tnfrsf17O88472 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC16.83■□□□□ 0.28
Tnfrsf17O88472 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Tnfrsf17O88472 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Tnfrsf17O88472 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Tnfrsf17O88472 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Tnfrsf17O88472 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Tnfrsf17O88472 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Tnfrsf17O88472 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Tnfrsf17O88472 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Tnfrsf17O88472 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Tnfrsf17O88472 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC16.82■□□□□ 0.28
Tnfrsf17O88472 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Tnfrsf17O88472 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Tnfrsf17O88472 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Tnfrsf17O88472 Gm8309-201ENSMUST00000206627 1448 ntBASIC16.82■□□□□ 0.28
Tnfrsf17O88472 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Tnfrsf17O88472 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Tnfrsf17O88472 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Tnfrsf17O88472 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Tnfrsf17O88472 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Tnfrsf17O88472 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Tnfrsf17O88472 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Tnfrsf17O88472 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Tnfrsf17O88472 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Tnfrsf17O88472 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Tnfrsf17O88472 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC16.81■□□□□ 0.28
Tnfrsf17O88472 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Tnfrsf17O88472 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Tnfrsf17O88472 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC16.81■□□□□ 0.28
Tnfrsf17O88472 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Tnfrsf17O88472 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
Tnfrsf17O88472 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Tnfrsf17O88472 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Tnfrsf17O88472 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Tnfrsf17O88472 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Tnfrsf17O88472 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Tnfrsf17O88472 Gm12504-201ENSMUST00000120860 2231 ntBASIC16.8■□□□□ 0.28
Tnfrsf17O88472 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Tnfrsf17O88472 Gm16061-201ENSMUST00000122167 857 ntBASIC16.8■□□□□ 0.28
Tnfrsf17O88472 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC16.8■□□□□ 0.28
Tnfrsf17O88472 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC16.8■□□□□ 0.28
Tnfrsf17O88472 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
Tnfrsf17O88472 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC16.8■□□□□ 0.28
Tnfrsf17O88472 Gm4217-201ENSMUST00000182243 1002 ntBASIC16.8■□□□□ 0.28
Tnfrsf17O88472 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Tnfrsf17O88472 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC16.8■□□□□ 0.28
Tnfrsf17O88472 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Tnfrsf17O88472 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Tnfrsf17O88472 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Tnfrsf17O88472 Gm10654-201ENSMUST00000098653 1633 ntBASIC16.8■□□□□ 0.28
Tnfrsf17O88472 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Tnfrsf17O88472 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Tnfrsf17O88472 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Tnfrsf17O88472 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms