Protein–RNA interactions for Protein: O70481

Ubr1, E3 ubiquitin-protein ligase UBR1, mousemouse

Predictions only

Length 1,757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1O70481 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Ubr1O70481 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Ubr1O70481 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Ubr1O70481 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Ubr1O70481 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC23.73■■□□□ 1.39
Ubr1O70481 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC23.73■■□□□ 1.39
Ubr1O70481 Tgds-204ENSMUST00000228543 1594 ntBASIC23.73■■□□□ 1.39
Ubr1O70481 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC23.73■■□□□ 1.39
Ubr1O70481 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
Ubr1O70481 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Ubr1O70481 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC23.71■■□□□ 1.39
Ubr1O70481 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Ubr1O70481 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
Ubr1O70481 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC23.71■■□□□ 1.39
Ubr1O70481 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC23.71■■□□□ 1.39
Ubr1O70481 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC23.71■■□□□ 1.39
Ubr1O70481 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Ubr1O70481 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC23.71■■□□□ 1.39
Ubr1O70481 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Ubr1O70481 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC23.7■■□□□ 1.39
Ubr1O70481 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC23.7■■□□□ 1.39
Ubr1O70481 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
Ubr1O70481 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
Ubr1O70481 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC23.7■■□□□ 1.38
Ubr1O70481 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
Ubr1O70481 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Ubr1O70481 Gm42922-201ENSMUST00000195887 2078 ntBASIC23.7■■□□□ 1.38
Ubr1O70481 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
Ubr1O70481 Gm10517-202ENSMUST00000192970 758 ntBASIC23.7■■□□□ 1.38
Ubr1O70481 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC23.69■■□□□ 1.38
Ubr1O70481 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Ubr1O70481 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Ubr1O70481 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC23.69■■□□□ 1.38
Ubr1O70481 Gm4217-201ENSMUST00000182243 1002 ntBASIC23.69■■□□□ 1.38
Ubr1O70481 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC23.69■■□□□ 1.38
Ubr1O70481 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
Ubr1O70481 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC23.69■■□□□ 1.38
Ubr1O70481 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC23.69■■□□□ 1.38
Ubr1O70481 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
Ubr1O70481 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Ubr1O70481 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC23.69■■□□□ 1.38
Ubr1O70481 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC23.69■■□□□ 1.38
Ubr1O70481 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
Ubr1O70481 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Ubr1O70481 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
Ubr1O70481 Gm4974-201ENSMUST00000209974 875 ntBASIC23.68■■□□□ 1.38
Ubr1O70481 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Ubr1O70481 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
Ubr1O70481 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Ubr1O70481 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC23.68■■□□□ 1.38
Ubr1O70481 Gm5784-201ENSMUST00000179344 2478 ntBASIC23.68■■□□□ 1.38
Ubr1O70481 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Ubr1O70481 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC23.68■■□□□ 1.38
Ubr1O70481 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC23.68■■□□□ 1.38
Ubr1O70481 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Ubr1O70481 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Ubr1O70481 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
Ubr1O70481 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC23.67■■□□□ 1.38
Ubr1O70481 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
Ubr1O70481 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Ubr1O70481 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Ubr1O70481 Gm43353-201ENSMUST00000199224 1295 ntBASIC23.67■■□□□ 1.38
Ubr1O70481 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC23.67■■□□□ 1.38
Ubr1O70481 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC23.67■■□□□ 1.38
Ubr1O70481 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC23.67■■□□□ 1.38
Ubr1O70481 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Ubr1O70481 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Ubr1O70481 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC23.66■■□□□ 1.38
Ubr1O70481 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
Ubr1O70481 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
Ubr1O70481 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
Ubr1O70481 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
Ubr1O70481 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC23.66■■□□□ 1.38
Ubr1O70481 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC23.66■■□□□ 1.38
Ubr1O70481 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Ubr1O70481 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC23.66■■□□□ 1.38
Ubr1O70481 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Ubr1O70481 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
Ubr1O70481 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Ubr1O70481 Gm27463-201ENSMUST00000183569 57 ntBASIC23.65■■□□□ 1.38
Ubr1O70481 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Ubr1O70481 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Ubr1O70481 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
Ubr1O70481 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Ubr1O70481 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC23.65■■□□□ 1.38
Ubr1O70481 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Ubr1O70481 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
Ubr1O70481 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC23.65■■□□□ 1.38
Ubr1O70481 Gm23634-201ENSMUST00000175071 91 ntBASIC23.65■■□□□ 1.38
Ubr1O70481 Gm45058-201ENSMUST00000205810 766 ntBASIC23.65■■□□□ 1.38
Ubr1O70481 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Ubr1O70481 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
Ubr1O70481 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
Ubr1O70481 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC23.64■■□□□ 1.38
Ubr1O70481 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC23.64■■□□□ 1.38
Ubr1O70481 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Ubr1O70481 Gm10013-201ENSMUST00000106074 672 ntBASIC23.64■■□□□ 1.37
Ubr1O70481 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC23.64■■□□□ 1.37
Ubr1O70481 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC23.64■■□□□ 1.37
Ubr1O70481 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Retrieved 100 of 76,532 protein–RNA pairs in 83.1 ms