Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pdlim1O70400 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pdlim1O70400 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pdlim1O70400 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pdlim1O70400 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
Pdlim1O70400 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC17.88■□□□□ 0.45
Pdlim1O70400 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pdlim1O70400 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pdlim1O70400 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pdlim1O70400 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pdlim1O70400 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pdlim1O70400 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
Pdlim1O70400 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC17.88■□□□□ 0.45
Pdlim1O70400 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC17.88■□□□□ 0.45
Pdlim1O70400 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pdlim1O70400 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pdlim1O70400 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pdlim1O70400 Gm21596-201ENSMUST00000178049 1316 ntBASIC17.88■□□□□ 0.45
Pdlim1O70400 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Pdlim1O70400 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pdlim1O70400 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Pdlim1O70400 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pdlim1O70400 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pdlim1O70400 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pdlim1O70400 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pdlim1O70400 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pdlim1O70400 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC17.87■□□□□ 0.45
Pdlim1O70400 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pdlim1O70400 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pdlim1O70400 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pdlim1O70400 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pdlim1O70400 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pdlim1O70400 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pdlim1O70400 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pdlim1O70400 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pdlim1O70400 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Pdlim1O70400 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pdlim1O70400 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pdlim1O70400 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pdlim1O70400 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Pdlim1O70400 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Pdlim1O70400 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pdlim1O70400 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC17.86■□□□□ 0.45
Pdlim1O70400 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Pdlim1O70400 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pdlim1O70400 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Pdlim1O70400 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC17.86■□□□□ 0.45
Pdlim1O70400 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC17.86■□□□□ 0.45
Pdlim1O70400 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pdlim1O70400 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Pdlim1O70400 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pdlim1O70400 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC17.86■□□□□ 0.45
Pdlim1O70400 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pdlim1O70400 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Pdlim1O70400 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pdlim1O70400 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Pdlim1O70400 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Pdlim1O70400 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Pdlim1O70400 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pdlim1O70400 Gm11249-201ENSMUST00000117071 859 ntBASIC17.85■□□□□ 0.45
Pdlim1O70400 Gm12669-201ENSMUST00000122162 1009 ntBASIC17.85■□□□□ 0.45
Pdlim1O70400 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Pdlim1O70400 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Pdlim1O70400 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pdlim1O70400 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC17.85■□□□□ 0.45
Pdlim1O70400 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Pdlim1O70400 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pdlim1O70400 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pdlim1O70400 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pdlim1O70400 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pdlim1O70400 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pdlim1O70400 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Pdlim1O70400 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pdlim1O70400 Gm35558-201ENSMUST00000222675 2219 ntBASIC17.84■□□□□ 0.45
Pdlim1O70400 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Pdlim1O70400 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pdlim1O70400 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Pdlim1O70400 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Pdlim1O70400 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pdlim1O70400 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Pdlim1O70400 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC17.84■□□□□ 0.45
Pdlim1O70400 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC17.84■□□□□ 0.45
Pdlim1O70400 Gm37856-201ENSMUST00000191634 999 ntBASIC17.84■□□□□ 0.45
Pdlim1O70400 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Pdlim1O70400 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Pdlim1O70400 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pdlim1O70400 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pdlim1O70400 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Pdlim1O70400 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pdlim1O70400 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
Pdlim1O70400 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Pdlim1O70400 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
Pdlim1O70400 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
Pdlim1O70400 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Pdlim1O70400 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Pdlim1O70400 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Pdlim1O70400 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Pdlim1O70400 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC17.83■□□□□ 0.44
Pdlim1O70400 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Pdlim1O70400 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms