Protein–RNA interactions for Protein: O55176

Pja1, E3 ubiquitin-protein ligase Praja-1, mousemouse

Predictions only

Length 578 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pja1O55176 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Pja1O55176 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pja1O55176 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC19.18■□□□□ 0.66
Pja1O55176 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pja1O55176 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Pja1O55176 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pja1O55176 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Pja1O55176 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pja1O55176 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC19.18■□□□□ 0.66
Pja1O55176 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pja1O55176 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Pja1O55176 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pja1O55176 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC19.17■□□□□ 0.66
Pja1O55176 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Pja1O55176 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
Pja1O55176 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pja1O55176 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pja1O55176 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pja1O55176 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC19.16■□□□□ 0.66
Pja1O55176 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pja1O55176 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pja1O55176 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pja1O55176 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Pja1O55176 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pja1O55176 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC19.16■□□□□ 0.66
Pja1O55176 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Pja1O55176 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
Pja1O55176 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pja1O55176 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pja1O55176 AC131586.2-201ENSMUST00000228370 1512 ntBASIC19.15■□□□□ 0.66
Pja1O55176 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pja1O55176 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC19.15■□□□□ 0.66
Pja1O55176 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pja1O55176 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pja1O55176 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pja1O55176 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pja1O55176 Gm38345-201ENSMUST00000192635 1748 ntBASIC19.15■□□□□ 0.66
Pja1O55176 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pja1O55176 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pja1O55176 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC19.15■□□□□ 0.66
Pja1O55176 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pja1O55176 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pja1O55176 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC19.15■□□□□ 0.66
Pja1O55176 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pja1O55176 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pja1O55176 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Pja1O55176 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC19.15■□□□□ 0.66
Pja1O55176 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Pja1O55176 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC19.14■□□□□ 0.66
Pja1O55176 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC19.14■□□□□ 0.66
Pja1O55176 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pja1O55176 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Pja1O55176 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Pja1O55176 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Pja1O55176 Gm8969-201ENSMUST00000199694 526 ntBASIC19.14■□□□□ 0.65
Pja1O55176 AC160393.1-201ENSMUST00000218378 1279 ntBASIC19.14■□□□□ 0.65
Pja1O55176 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC19.14■□□□□ 0.65
Pja1O55176 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pja1O55176 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pja1O55176 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC19.14■□□□□ 0.65
Pja1O55176 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Pja1O55176 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Pja1O55176 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Pja1O55176 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Pja1O55176 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Pja1O55176 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Pja1O55176 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pja1O55176 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Pja1O55176 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pja1O55176 Gm13234-201ENSMUST00000120010 747 ntBASIC19.13■□□□□ 0.65
Pja1O55176 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC19.13■□□□□ 0.65
Pja1O55176 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC19.13■□□□□ 0.65
Pja1O55176 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC19.13■□□□□ 0.65
Pja1O55176 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Pja1O55176 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pja1O55176 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Pja1O55176 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pja1O55176 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pja1O55176 Gm37374-201ENSMUST00000194954 1829 ntBASIC19.13■□□□□ 0.65
Pja1O55176 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pja1O55176 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pja1O55176 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pja1O55176 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pja1O55176 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pja1O55176 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pja1O55176 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Pja1O55176 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Pja1O55176 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC19.12■□□□□ 0.65
Pja1O55176 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC19.12■□□□□ 0.65
Pja1O55176 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pja1O55176 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pja1O55176 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Pja1O55176 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pja1O55176 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Pja1O55176 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pja1O55176 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Pja1O55176 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pja1O55176 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pja1O55176 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pja1O55176 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms