Protein–RNA interactions for Protein: O55057

Pde6d, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, mousemouse

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6dO55057 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pde6dO55057 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pde6dO55057 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pde6dO55057 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC14.34□□□□□ -0.11
Pde6dO55057 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Pde6dO55057 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pde6dO55057 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pde6dO55057 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pde6dO55057 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Pde6dO55057 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pde6dO55057 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC14.34□□□□□ -0.11
Pde6dO55057 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC14.34□□□□□ -0.11
Pde6dO55057 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
Pde6dO55057 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pde6dO55057 Krt8-ps-201ENSMUST00000208495 945 ntBASIC14.34□□□□□ -0.11
Pde6dO55057 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pde6dO55057 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pde6dO55057 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Pde6dO55057 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pde6dO55057 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pde6dO55057 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pde6dO55057 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
Pde6dO55057 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Pde6dO55057 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Pde6dO55057 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Pde6dO55057 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Pde6dO55057 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
Pde6dO55057 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pde6dO55057 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pde6dO55057 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Pde6dO55057 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Pde6dO55057 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pde6dO55057 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pde6dO55057 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pde6dO55057 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pde6dO55057 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pde6dO55057 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pde6dO55057 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pde6dO55057 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pde6dO55057 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pde6dO55057 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pde6dO55057 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pde6dO55057 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Pde6dO55057 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pde6dO55057 Gm13238-201ENSMUST00000117655 780 ntBASIC14.32□□□□□ -0.12
Pde6dO55057 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pde6dO55057 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pde6dO55057 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pde6dO55057 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pde6dO55057 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Pde6dO55057 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pde6dO55057 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pde6dO55057 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pde6dO55057 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pde6dO55057 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Pde6dO55057 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pde6dO55057 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pde6dO55057 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pde6dO55057 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pde6dO55057 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pde6dO55057 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Pde6dO55057 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pde6dO55057 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Pde6dO55057 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Pde6dO55057 Gm8770-201ENSMUST00000121113 1109 ntBASIC14.31□□□□□ -0.12
Pde6dO55057 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Pde6dO55057 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pde6dO55057 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pde6dO55057 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pde6dO55057 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pde6dO55057 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Pde6dO55057 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pde6dO55057 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pde6dO55057 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pde6dO55057 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pde6dO55057 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pde6dO55057 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pde6dO55057 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pde6dO55057 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC14.3□□□□□ -0.12
Pde6dO55057 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC14.3□□□□□ -0.12
Pde6dO55057 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Pde6dO55057 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Pde6dO55057 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pde6dO55057 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pde6dO55057 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pde6dO55057 Gm43808-201ENSMUST00000202534 2065 ntBASIC14.3□□□□□ -0.12
Pde6dO55057 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pde6dO55057 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pde6dO55057 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Pde6dO55057 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Pde6dO55057 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Pde6dO55057 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pde6dO55057 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pde6dO55057 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pde6dO55057 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pde6dO55057 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pde6dO55057 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC14.29□□□□□ -0.12
Pde6dO55057 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pde6dO55057 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pde6dO55057 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms