Protein–RNA interactions for Protein: O54990

Prom1, Prominin-1, mousemouse

Predictions only

Length 867 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prom1O54990 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
Prom1O54990 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Prom1O54990 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Prom1O54990 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Prom1O54990 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
Prom1O54990 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Prom1O54990 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Prom1O54990 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC20.07■□□□□ 0.8
Prom1O54990 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Prom1O54990 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Prom1O54990 Notumos-201ENSMUST00000151998 2659 ntBASIC20.07■□□□□ 0.8
Prom1O54990 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Prom1O54990 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Prom1O54990 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Prom1O54990 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Prom1O54990 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Prom1O54990 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC20.06■□□□□ 0.8
Prom1O54990 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Prom1O54990 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Prom1O54990 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Prom1O54990 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Prom1O54990 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Prom1O54990 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Prom1O54990 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Prom1O54990 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Prom1O54990 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Prom1O54990 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Prom1O54990 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
Prom1O54990 Timm23-208ENSMUST00000226683 750 ntBASIC20.05■□□□□ 0.8
Prom1O54990 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Prom1O54990 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Prom1O54990 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC20.05■□□□□ 0.8
Prom1O54990 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC20.05■□□□□ 0.8
Prom1O54990 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Prom1O54990 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC20.05■□□□□ 0.8
Prom1O54990 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC20.05■□□□□ 0.8
Prom1O54990 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Prom1O54990 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Prom1O54990 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Prom1O54990 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Prom1O54990 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Prom1O54990 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Prom1O54990 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Prom1O54990 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Prom1O54990 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Prom1O54990 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC20.04■□□□□ 0.8
Prom1O54990 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Prom1O54990 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Prom1O54990 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Prom1O54990 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC20.04■□□□□ 0.8
Prom1O54990 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC20.04■□□□□ 0.8
Prom1O54990 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Prom1O54990 Odf3b-204ENSMUST00000227834 930 ntBASIC20.04■□□□□ 0.8
Prom1O54990 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Prom1O54990 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC20.04■□□□□ 0.8
Prom1O54990 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Prom1O54990 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Prom1O54990 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Prom1O54990 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Prom1O54990 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Prom1O54990 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Prom1O54990 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC20.03■□□□□ 0.8
Prom1O54990 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Prom1O54990 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Prom1O54990 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Prom1O54990 Mir2861-201ENSMUST00000175539 82 ntBASIC20.03■□□□□ 0.8
Prom1O54990 Mir6349-201ENSMUST00000184059 97 ntBASIC20.03■□□□□ 0.8
Prom1O54990 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC20.03■□□□□ 0.8
Prom1O54990 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
Prom1O54990 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Prom1O54990 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Prom1O54990 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Prom1O54990 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Prom1O54990 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Prom1O54990 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Prom1O54990 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Prom1O54990 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Prom1O54990 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
Prom1O54990 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Prom1O54990 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC20.02■□□□□ 0.8
Prom1O54990 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC20.02■□□□□ 0.8
Prom1O54990 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC20.02■□□□□ 0.8
Prom1O54990 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC20.02■□□□□ 0.8
Prom1O54990 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC20.02■□□□□ 0.8
Prom1O54990 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC20.02■□□□□ 0.8
Prom1O54990 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Prom1O54990 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Prom1O54990 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC20.02■□□□□ 0.8
Prom1O54990 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Prom1O54990 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
Prom1O54990 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Prom1O54990 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Prom1O54990 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Prom1O54990 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Prom1O54990 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Prom1O54990 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Prom1O54990 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Prom1O54990 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Prom1O54990 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Prom1O54990 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms