Protein–RNA interactions for Protein: O54785

Limk2, LIM domain kinase 2, mousemouse

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limk2O54785 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Limk2O54785 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Limk2O54785 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Limk2O54785 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
Limk2O54785 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC18.39■□□□□ 0.53
Limk2O54785 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC18.39■□□□□ 0.53
Limk2O54785 Gm27275-201ENSMUST00000184318 272 ntBASIC18.39■□□□□ 0.53
Limk2O54785 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC18.39■□□□□ 0.53
Limk2O54785 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Limk2O54785 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC18.39■□□□□ 0.53
Limk2O54785 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Limk2O54785 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Limk2O54785 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Limk2O54785 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Limk2O54785 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Limk2O54785 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Limk2O54785 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Limk2O54785 Gm12896-201ENSMUST00000118430 226 ntBASIC18.38■□□□□ 0.53
Limk2O54785 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Limk2O54785 Gm44549-201ENSMUST00000208351 577 ntBASIC18.38■□□□□ 0.53
Limk2O54785 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Limk2O54785 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Limk2O54785 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
Limk2O54785 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Limk2O54785 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Limk2O54785 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Limk2O54785 Gm35558-201ENSMUST00000222675 2219 ntBASIC18.38■□□□□ 0.53
Limk2O54785 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Limk2O54785 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Limk2O54785 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Limk2O54785 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC18.37■□□□□ 0.53
Limk2O54785 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC18.37■□□□□ 0.53
Limk2O54785 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Limk2O54785 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Limk2O54785 AC123834.2-201ENSMUST00000224038 2340 ntBASIC18.37■□□□□ 0.53
Limk2O54785 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Limk2O54785 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Limk2O54785 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Limk2O54785 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Limk2O54785 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Limk2O54785 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Limk2O54785 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Limk2O54785 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Limk2O54785 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Limk2O54785 Gm29241-201ENSMUST00000189260 1096 ntBASIC18.36■□□□□ 0.53
Limk2O54785 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Limk2O54785 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Limk2O54785 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Limk2O54785 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Limk2O54785 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Limk2O54785 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
Limk2O54785 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Limk2O54785 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Limk2O54785 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Limk2O54785 Gm38345-201ENSMUST00000192635 1748 ntBASIC18.35■□□□□ 0.53
Limk2O54785 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Limk2O54785 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Limk2O54785 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Limk2O54785 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
Limk2O54785 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Limk2O54785 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Limk2O54785 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Limk2O54785 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC18.35■□□□□ 0.53
Limk2O54785 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC18.35■□□□□ 0.53
Limk2O54785 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Limk2O54785 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Limk2O54785 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC18.35■□□□□ 0.53
Limk2O54785 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Limk2O54785 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Limk2O54785 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Limk2O54785 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Limk2O54785 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Limk2O54785 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Limk2O54785 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Limk2O54785 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC18.34■□□□□ 0.53
Limk2O54785 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC18.34■□□□□ 0.53
Limk2O54785 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Limk2O54785 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
Limk2O54785 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Limk2O54785 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Limk2O54785 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC18.34■□□□□ 0.53
Limk2O54785 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Limk2O54785 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC18.34■□□□□ 0.53
Limk2O54785 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Limk2O54785 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Limk2O54785 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Limk2O54785 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Limk2O54785 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Limk2O54785 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Limk2O54785 Tgds-204ENSMUST00000228543 1594 ntBASIC18.34■□□□□ 0.53
Limk2O54785 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Limk2O54785 Dapk1-207ENSMUST00000226059 5009 ntBASIC18.33■□□□□ 0.53
Limk2O54785 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Limk2O54785 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Limk2O54785 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Limk2O54785 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Limk2O54785 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Limk2O54785 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
Limk2O54785 Gm2399-201ENSMUST00000104944 225 ntBASIC18.33■□□□□ 0.52
Limk2O54785 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms