Protein–RNA interactions for Protein: O35604

Npc1, Niemann-Pick C1 protein, mousemouse

Predictions only

Length 1,277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1O35604 Gm15853-202ENSMUST00000195518 2041 ntBASIC17.69■□□□□ 0.42
Npc1O35604 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Npc1O35604 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Npc1O35604 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Npc1O35604 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Npc1O35604 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Npc1O35604 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Npc1O35604 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Npc1O35604 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Npc1O35604 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Npc1O35604 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Npc1O35604 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Npc1O35604 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Npc1O35604 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Npc1O35604 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Npc1O35604 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Npc1O35604 Gm10653-202ENSMUST00000139570 835 ntBASIC17.68■□□□□ 0.42
Npc1O35604 Gm22325-201ENSMUST00000158904 308 ntBASIC17.68■□□□□ 0.42
Npc1O35604 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Npc1O35604 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Npc1O35604 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Npc1O35604 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Npc1O35604 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Npc1O35604 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Npc1O35604 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Npc1O35604 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Npc1O35604 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Npc1O35604 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Npc1O35604 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Npc1O35604 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Npc1O35604 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC17.67■□□□□ 0.42
Npc1O35604 AC135637.1-201ENSMUST00000227750 365 ntBASIC17.67■□□□□ 0.42
Npc1O35604 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Npc1O35604 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Npc1O35604 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Npc1O35604 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Npc1O35604 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Npc1O35604 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Npc1O35604 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Npc1O35604 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC17.67■□□□□ 0.42
Npc1O35604 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Npc1O35604 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC17.66■□□□□ 0.42
Npc1O35604 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Npc1O35604 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Npc1O35604 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Npc1O35604 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Npc1O35604 Gm43182-201ENSMUST00000199476 2528 ntBASIC17.66■□□□□ 0.42
Npc1O35604 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Npc1O35604 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Npc1O35604 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Npc1O35604 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Npc1O35604 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC17.66■□□□□ 0.42
Npc1O35604 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Npc1O35604 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Npc1O35604 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Npc1O35604 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Npc1O35604 Gm37856-201ENSMUST00000191634 999 ntBASIC17.65■□□□□ 0.42
Npc1O35604 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC17.65■□□□□ 0.42
Npc1O35604 Trmt13-210ENSMUST00000198454 880 ntBASIC17.65■□□□□ 0.42
Npc1O35604 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Npc1O35604 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Npc1O35604 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Npc1O35604 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Npc1O35604 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Npc1O35604 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Npc1O35604 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Npc1O35604 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Npc1O35604 Gm7856-201ENSMUST00000117514 1493 ntBASIC17.64■□□□□ 0.41
Npc1O35604 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Npc1O35604 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
Npc1O35604 AC140264.2-202ENSMUST00000218746 817 ntBASIC17.64■□□□□ 0.41
Npc1O35604 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC17.64■□□□□ 0.41
Npc1O35604 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Npc1O35604 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Npc1O35604 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Npc1O35604 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Npc1O35604 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Npc1O35604 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC17.64■□□□□ 0.41
Npc1O35604 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Npc1O35604 Dio3-201ENSMUST00000097228 1449 ntBASIC17.64■□□□□ 0.41
Npc1O35604 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Npc1O35604 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Npc1O35604 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Npc1O35604 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Npc1O35604 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Npc1O35604 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC17.63■□□□□ 0.41
Npc1O35604 Gm12896-201ENSMUST00000118430 226 ntBASIC17.63■□□□□ 0.41
Npc1O35604 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Npc1O35604 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Npc1O35604 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Npc1O35604 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Npc1O35604 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC17.63■□□□□ 0.41
Npc1O35604 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Npc1O35604 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Npc1O35604 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Npc1O35604 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Npc1O35604 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Npc1O35604 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Npc1O35604 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Npc1O35604 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC17.62■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms