Protein–RNA interactions for Protein: O08811

Ercc2, General transcription and DNA repair factor IIH helicase subunit XPD, mousemouse

Known RBP Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc2O08811 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ercc2O08811 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ercc2O08811 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ercc2O08811 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ercc2O08811 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC18.55■□□□□ 0.56
Ercc2O08811 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ercc2O08811 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ercc2O08811 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ercc2O08811 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ercc2O08811 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Ercc2O08811 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ercc2O08811 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ercc2O08811 Gm2399-201ENSMUST00000104944 225 ntBASIC18.54■□□□□ 0.56
Ercc2O08811 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC18.54■□□□□ 0.56
Ercc2O08811 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Ercc2O08811 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Ercc2O08811 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ercc2O08811 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ercc2O08811 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ercc2O08811 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ercc2O08811 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ercc2O08811 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC18.54■□□□□ 0.56
Ercc2O08811 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ercc2O08811 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ercc2O08811 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ercc2O08811 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ercc2O08811 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ercc2O08811 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Ercc2O08811 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ercc2O08811 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ercc2O08811 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Ercc2O08811 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ercc2O08811 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ercc2O08811 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
Ercc2O08811 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ercc2O08811 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC18.53■□□□□ 0.56
Ercc2O08811 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ercc2O08811 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC18.53■□□□□ 0.56
Ercc2O08811 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ercc2O08811 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Ercc2O08811 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Ercc2O08811 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC18.53■□□□□ 0.56
Ercc2O08811 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ercc2O08811 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ercc2O08811 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Ercc2O08811 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC18.52■□□□□ 0.56
Ercc2O08811 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ercc2O08811 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ercc2O08811 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC18.52■□□□□ 0.56
Ercc2O08811 Gm29257-201ENSMUST00000186115 639 ntBASIC18.52■□□□□ 0.56
Ercc2O08811 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Ercc2O08811 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC18.52■□□□□ 0.56
Ercc2O08811 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Ercc2O08811 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Ercc2O08811 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Ercc2O08811 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ercc2O08811 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Ercc2O08811 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC18.51■□□□□ 0.55
Ercc2O08811 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ercc2O08811 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Ercc2O08811 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
Ercc2O08811 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC18.51■□□□□ 0.55
Ercc2O08811 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Ercc2O08811 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Ercc2O08811 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC18.51■□□□□ 0.55
Ercc2O08811 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ercc2O08811 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ercc2O08811 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ercc2O08811 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ercc2O08811 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ercc2O08811 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC18.51■□□□□ 0.55
Ercc2O08811 Gm44544-201ENSMUST00000207052 1844 ntBASIC18.51■□□□□ 0.55
Ercc2O08811 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ercc2O08811 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ercc2O08811 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Ercc2O08811 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC18.5■□□□□ 0.55
Ercc2O08811 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Ercc2O08811 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ercc2O08811 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Ercc2O08811 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Ercc2O08811 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ercc2O08811 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC18.5■□□□□ 0.55
Ercc2O08811 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC18.5■□□□□ 0.55
Ercc2O08811 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ercc2O08811 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ercc2O08811 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ercc2O08811 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ercc2O08811 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Ercc2O08811 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ercc2O08811 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ercc2O08811 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC18.49■□□□□ 0.55
Ercc2O08811 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Ercc2O08811 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC18.49■□□□□ 0.55
Ercc2O08811 Wnt10b-205ENSMUST00000226846 1204 ntBASIC18.49■□□□□ 0.55
Ercc2O08811 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC18.49■□□□□ 0.55
Ercc2O08811 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC18.49■□□□□ 0.55
Ercc2O08811 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ercc2O08811 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Ercc2O08811 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC18.49■□□□□ 0.55
Ercc2O08811 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms